RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CCPG1Q9ULG6 757 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 MYH7BA7E2Y1 1941 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 SMCO2A6NFE2 343 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 TLR2O60603 784 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 ADCY7P51828 1080 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 NLRP5P59047 1200 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 ERVK-9P63128 1117 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 ERVK-24P63145 666 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 IRF5Q13568 498 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 RILPL1Q5EBL4 403 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 REXO1Q8N1G1 1221 aaKnown RBP8.58□□□□□ -1.04
GINS3-205ENST00000564814 COA7Q96BR5 231 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 MROH8Q9H579 483 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 PSTPIP2Q9H939 334 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 VAT1LQ9HCJ6 419 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 BTBD7Q9P203 1132 aa8.58□□□□□ -1.04
GINS3-205ENST00000564814 PFASO15067 1338 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 RPTORQ8N122 1335 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 VPS37CA5D8V6 355 aaPredicted RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 KIF28PB7ZC32 967 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 STRNO43815 780 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 TRPA1O75762 1119 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 BMP15O95972 392 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 CYP3A4P08684 503 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 CIITAP33076 1130 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 SREBF1P36956 1147 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 USP11P51784 963 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 CCNA1P78396 465 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 SNRNP48Q6IEG0 339 aaKnown RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 XRRA1Q6P2D8 792 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 C17orf99Q6UX52 265 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 TMEM87AQ8NBN3 555 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 DNERQ8NFT8 737 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 MBOAT7Q96N66 472 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 NAP1L4Q99733 375 aaKnown RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 MOV10L1Q9BXT6 1211 aaKnown RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 ACAD9Q9H845 621 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 RAVER2Q9HCJ3 691 aaKnown RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 TXNRD2Q9NNW7 524 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.57□□□□□ -1.04
GINS3-205ENST00000564814 GJB4Q9NTQ9 266 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 PCDHA6Q9UN73 950 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 KCNJ14Q9UNX9 436 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 PCDHA8Q9Y5H6 950 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 PLXNB2O15031 1838 aa8.57□□□□□ -1.04
GINS3-205ENST00000564814 ELP1O95163 1332 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 ZNFX1Q9P2E3 1918 aaKnown RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 MGAMO43451 1857 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 CYP3A7-CYP3A51PA0A087WV96 503 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 GCOM1H8Y6P7 765 aaPredicted RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 YEATS4O95619 227 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 POLR2MP0CAP2 368 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 GCFC2P16383 781 aaKnown RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 CYP3A7P24462 503 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 MAPK4P31152 587 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 NASPP49321 788 aaPredicted RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 NR5A1Q13285 461 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 NONOQ15233 471 aaKnown RBP eCLIP8.56□□□□□ -1.04
GINS3-205ENST00000564814 PPP4R3AQ6IN85 833 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 GPRC5AQ8NFJ5 357 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 MORC4Q8TE76 937 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 SMCR8Q8TEV9 937 aaPredicted RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 EHMT1Q9H9B1 1298 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 RNF146Q9NTX7 359 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 RNF186Q9NXI6 227 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 CFAP45Q9UL16 551 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 RIPK3Q9Y572 518 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 CTDP1Q9Y5B0 961 aaPredicted RBP8.56□□□□□ -1.04
GINS3-205ENST00000564814 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
GINS3-205ENST00000564814 A0A0C4DFX4 3053 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 LAD1O00515 517 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 NFIBO00712 420 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 EDIL3O43854 480 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 STAM2O75886 525 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 CYP2C8P10632 490 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 EDNRBP24530 442 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 RPS6P62753 249 aaKnown RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 KRT85P78386 507 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 Q3C1V9 767 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 USH1GQ495M9 461 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 MUM1L1Q5H9M0 696 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 CCDC174Q6PII3 467 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 POTEHQ6S545 545 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 NIPA1Q7RTP0 329 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 ZNF467Q7Z7K2 595 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms