RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 INPP5FQ9Y2H2 1132 aa7.2□□□□□ -1.26
CHD9-212ENST00000564641 F8W031 263 aaPredicted RBP7.19□□□□□ -1.26
CHD9-212ENST00000564641 STXBP3O00186 592 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 GLI4P10075 376 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 NCAM1P13591 858 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 PAMP19021 973 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 TRIM26Q12899 539 aaPredicted RBP7.19□□□□□ -1.26
CHD9-212ENST00000564641 SLC9A5Q14940 896 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 NCAPHQ15003 741 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 ERICH6BQ5W0A0 696 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 KIAA1211LQ6NV74 962 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 LZTR1Q8N653 840 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 FGD4Q96M96 766 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 CCSER2Q9H7U1 834 aa7.19□□□□□ -1.26
CHD9-212ENST00000564641 LUC7LQ9NQ29 371 aaKnown RBP7.19□□□□□ -1.26
CHD9-212ENST00000564641 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 PRR5P85299 388 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 C9orf131Q5VYM1 1079 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 NETO2Q8NC67 525 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 APBA2Q99767 749 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 RTEL1Q9NZ71 1219 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 KIAA1522Q9P206 1035 aaPredicted RBP7.18□□□□□ -1.26
CHD9-212ENST00000564641 FAN1Q9Y2M0 1017 aa7.18□□□□□ -1.26
CHD9-212ENST00000564641 NPHP3-ACAD11A0A0J9YXS1 232 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 VAMP4O75379 141 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 ZBTB7AO95365 584 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 FBLN1P23142 703 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 TACR1P25103 407 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 NFIXQ14938 502 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 DPY19L1Q2PZI1 675 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 VPS37DQ86XT2 251 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 TSPAN17Q96FV3 270 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 PEX11GQ96HA9 241 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 XYLT2Q9H1B5 865 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHD9-212ENST00000564641 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
CHD9-212ENST00000564641 NOP56O00567 594 aaKnown RBP7.16□□□□□ -1.26
CHD9-212ENST00000564641 BVESQ8NE79 360 aa7.16□□□□□ -1.26
CHD9-212ENST00000564641 EMC9Q9Y3B6 208 aa7.16□□□□□ -1.26
CHD9-212ENST00000564641 A0A0G2JLL6 359 aaPredicted RBP7.15□□□□□ -1.26
CHD9-212ENST00000564641 ZC3H12DA2A288 527 aaKnown RBP7.15□□□□□ -1.26
CHD9-212ENST00000564641 NPHS1O60500 1241 aa7.15□□□□□ -1.26
CHD9-212ENST00000564641 FOXO4P98177 505 aa7.15□□□□□ -1.26
CHD9-212ENST00000564641 COPS5Q92905 334 aa7.15□□□□□ -1.26
CHD9-212ENST00000564641 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.26
CHD9-212ENST00000564641 FOXD2O60548 495 aaPredicted RBP7.14□□□□□ -1.27
CHD9-212ENST00000564641 SYN1P17600 705 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
CHD9-212ENST00000564641 TNNI3KQ59H18 835 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 ZNF513Q8N8E2 541 aaPredicted RBP7.14□□□□□ -1.27
CHD9-212ENST00000564641 CXorf38Q8TB03 319 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 USP33Q8TEY7 942 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 CPA5Q8WXQ8 436 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 ALG3Q92685 438 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 ANAPC16Q96DE5 110 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 MMP19Q99542 508 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 CAPN10Q9HC96 672 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 RWDD3Q9Y3V2 267 aa7.14□□□□□ -1.27
CHD9-212ENST00000564641 OTOL1A6NHN0 477 aaPredicted RBP7.13□□□□□ -1.27
CHD9-212ENST00000564641 GNL2Q13823 731 aaKnown RBP7.13□□□□□ -1.27
CHD9-212ENST00000564641 IQCEQ6IPM2 695 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 FRMD5Q7Z6J6 570 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 B3GNT8Q7Z7M8 397 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 CPNE8Q86YQ8 564 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 FAM169BQ8N8A8 192 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 MTA3Q9BTC8 594 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 CYP26B1Q9NR63 512 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 PMF1-BGLAPU3KQ54 211 aa7.13□□□□□ -1.27
CHD9-212ENST00000564641 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 FFAR3O14843 346 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 KCNH1O95259 989 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 ASGR2P07307 311 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 LIMS1P48059 325 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 KCNC1P48547 511 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 VMACQ2NL98 169 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 WWC2Q6AWC2 1192 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 GULP1Q9UBP9 304 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 APEX2Q9UBZ4 518 aa7.12□□□□□ -1.27
CHD9-212ENST00000564641 C7orf72A4D263 438 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 ATF2P15336 505 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 HTRA3P83110 453 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 SCRN1Q12765 414 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 SAPCD2Q86UD0 394 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 TRIM59Q8IWR1 403 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 FNIP1Q8TF40 1166 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
CHD9-212ENST00000564641 SH3D21A4FU49 640 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHD9-212ENST00000564641 PLS3P13797 630 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 PMLP29590 882 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
CHD9-212ENST00000564641 TP53I13Q8NBR0 393 aaPredicted RBP7.1□□□□□ -1.27
CHD9-212ENST00000564641 FEZF2Q8TBJ5 459 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 AP5M1Q9H0R1 490 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 NKX2-4Q9H2Z4 354 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms