RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 BTBD18B2RXH4 712 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 M0R2N6 131 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 MEIS2O14770 477 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 OPLAHO14841 1288 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 CLK2P49760 499 aaKnown RBP21.52■■□□□ 1.04
SPNS1-206ENST00000564476 HSD17B4P51659 736 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 FOSBP53539 338 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 CRHR2Q13324 411 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 AP3B2Q13367 1082 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 PKP1Q13835 747 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 MCTP1Q6DN14 999 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 ZDHHC9Q9Y397 364 aa21.52■■□□□ 1.04
SPNS1-206ENST00000564476 STRNO43815 780 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 ERCC3P19447 782 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 MAPK4P31152 587 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 MUM1L1Q5H9M0 696 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 KRT25Q7Z3Z0 450 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 NOSTRINQ8IVI9 506 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 CCAR1Q8IX12 1150 aaKnown RBP21.51■■□□□ 1.03
SPNS1-206ENST00000564476 ABRAQ8N0Z2 381 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 PCDHA6Q9UN73 950 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 PCDHA8Q9Y5H6 950 aa21.51■■□□□ 1.03
SPNS1-206ENST00000564476 CASP8AP2Q9UKL3 1982 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 F13A1P00488 732 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 CFBP00751 764 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 TNFRSF25Q93038 417 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 HOMER2Q9NSB8 354 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 SAGE1Q9NXZ1 904 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 PFASO15067 1338 aa21.5■■□□□ 1.03
SPNS1-206ENST00000564476 RBBP6Q7Z6E9 1792 aaKnown RBP21.49■■□□□ 1.03
SPNS1-206ENST00000564476 NFIBO00712 420 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 RESTQ13127 1097 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 ATL3Q6DD88 541 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 RNF207Q6ZRF8 634 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 EHMT1Q9H9B1 1298 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 CPA4Q9UI42 421 aa21.49■■□□□ 1.03
SPNS1-206ENST00000564476 CCDC194A0A1B0GVG4 234 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 SPDYE3A6NKU9 549 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 FCER1AP12319 257 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 ANKRD35Q8N283 1001 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 OXER1Q8TDS5 423 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 RNF186Q9NXI6 227 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 BIN2Q9UBW5 565 aaPredicted RBP21.48■■□□□ 1.03
SPNS1-206ENST00000564476 MYH15Q9Y2K3 1946 aa21.48■■□□□ 1.03
SPNS1-206ENST00000564476 TRAPPC10P48553 1259 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 RPS6P62753 249 aaKnown RBP21.47■■□□□ 1.03
SPNS1-206ENST00000564476 NR5A1Q13285 461 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 KCTD2Q14681 263 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 NONOQ15233 471 aaKnown RBP eCLIP21.47■■□□□ 1.03
SPNS1-206ENST00000564476 RILPL1Q5EBL4 403 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 USP17L6PQ6QN14 398 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 NSMFQ6X4W1 530 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 TBC1D5Q92609 795 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 A1CFQ9NQ94 594 aaKnown RBP21.47■■□□□ 1.03
SPNS1-206ENST00000564476 CYP39A1Q9NYL5 469 aa21.47■■□□□ 1.03
SPNS1-206ENST00000564476 NOL7Q9UMY1 257 aaKnown RBP21.47■■□□□ 1.03
SPNS1-206ENST00000564476 ZNFX1Q9P2E3 1918 aaKnown RBP21.47■■□□□ 1.03
SPNS1-206ENST00000564476 PEX10O60683 326 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 TAL1P17542 331 aaPredicted RBP21.46■■□□□ 1.03
SPNS1-206ENST00000564476 BAATQ14032 418 aaPredicted RBP21.46■■□□□ 1.03
SPNS1-206ENST00000564476 NOM1Q5C9Z4 860 aaKnown RBP21.46■■□□□ 1.03
SPNS1-206ENST00000564476 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 FERMT3Q86UX7 667 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 SYTL5Q8TDW5 730 aaPredicted RBP21.46■■□□□ 1.03
SPNS1-206ENST00000564476 NAP1L4Q99733 375 aaKnown RBP21.46■■□□□ 1.03
SPNS1-206ENST00000564476 PORCNQ9H237 461 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 EFCC1Q9HA90 598 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 IVNS1ABPQ9Y6Y0 642 aa21.46■■□□□ 1.03
SPNS1-206ENST00000564476 TCHHQ07283 1943 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 LOC102724159A0A0B4J2E5 919 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 KIF28PB7ZC32 967 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 TRPA1O75762 1119 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 USP11P51784 963 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 PWP2Q15269 919 aaKnown RBP21.45■■□□□ 1.02
SPNS1-206ENST00000564476 UBE2SQ16763 222 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 PLEKHH3Q7Z736 793 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 DNERQ8NFT8 737 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 MMP19Q99542 508 aa21.45■■□□□ 1.02
SPNS1-206ENST00000564476 B4DLN1 442 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 ADAMTS3O15072 1205 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
SPNS1-206ENST00000564476 XRRA1Q6P2D8 792 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 PIK3AP1Q6ZUJ8 805 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 FCHSD1Q86WN1 690 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 ZNF396Q96N95 335 aaPredicted RBP21.44■■□□□ 1.02
SPNS1-206ENST00000564476 TMEM260Q9NX78 707 aa21.44■■□□□ 1.02
SPNS1-206ENST00000564476 ADD3Q9UEY8 706 aaKnown RBP21.44■■□□□ 1.02
SPNS1-206ENST00000564476 SLC15A5A6NIM6 579 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 POTEB2H3BUK9 544 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 PTPREP23469 700 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 SREBF1P36956 1147 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 ORC2Q13416 577 aaPredicted RBP21.43■■□□□ 1.02
SPNS1-206ENST00000564476 WDR78Q5VTH9 848 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 MYSM1Q5VVJ2 828 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 GPR142Q7Z601 462 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 RASGRP4Q8TDF6 673 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 NSUN6Q8TEA1 469 aaKnown RBP21.43■■□□□ 1.02
SPNS1-206ENST00000564476 ANO3Q9BYT9 981 aa21.43■■□□□ 1.02
SPNS1-206ENST00000564476 SLC5A4Q9NY91 659 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms