RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 KLRF2D3W0D1 207 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 SOX1O00570 391 aaPredicted RBP23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 ASGR1P07306 291 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 BEX3Q00994 111 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 GRM4Q14833 912 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 TMEM67Q5HYA8 995 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 GNASQ5JWF2 1037 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 SH3RF1Q7Z6J0 888 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 ANO2Q9NQ90 1003 aa23.28■■□□□ 1.32
SHCBP1-203ENST00000564272 PALM3A6NDB9 673 aaPredicted RBP23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 SLC27A2O14975 620 aa23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 PQBP1O60828 265 aaKnown RBP23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 SLC35G1Q2M3R5 365 aa23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 FBXO11Q86XK2 927 aa23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 PCSK9Q8NBP7 692 aaKnown RBP23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 NUP133Q8WUM0 1156 aa23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 TBC1D5Q92609 795 aa23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 LBHD1Q9BQE6 289 aaPredicted RBP23.27■■□□□ 1.32
SHCBP1-203ENST00000564272 LOC102724159A0A0B4J2E5 919 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 TRIM43BA6NCK2 446 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 NKX3-2P78367 333 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 COL9A3Q14050 684 aaPredicted RBP23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 PWP2Q15269 919 aaKnown RBP23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 TDHQ8IZJ6 230 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 GPHNQ9NQX3 736 aaPredicted RBP23.26■■□□□ 1.31
SHCBP1-203ENST00000564272 DYNC1LI2O43237 492 aaPredicted RBP23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 PPP1R11O60927 126 aaPredicted RBP23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 EDNRBP24530 442 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 PDE4DQ08499 809 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 TROAPQ12815 778 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 CREB3L3Q68CJ9 461 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 IQSEC1Q6DN90 963 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 IGDCC4Q8TDY8 1250 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 MTMR8Q96EF0 704 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 GLT1D1Q96MS3 346 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 AP5M1Q9H0R1 490 aa23.25■■□□□ 1.31
SHCBP1-203ENST00000564272 CLTBP09497 229 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 FSCN1Q16658 493 aaKnown RBP23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 DNERQ8NFT8 737 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 SYTL5Q8TDW5 730 aaPredicted RBP23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 LRCH3Q96II8 777 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 AMNQ9BXJ7 453 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 LY9Q9HBG7 655 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 COL20A1Q9P218 1284 aa23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 MRPL11Q9Y3B7 192 aaKnown RBP23.24■■□□□ 1.31
SHCBP1-203ENST00000564272 ZBTB5O15062 677 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 PRC1O43663 620 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 NECTIN1Q15223 517 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 CATIPQ7Z7H3 387 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 BADQ92934 168 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 VTI1AQ96AJ9 217 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 MPHOSPH6Q99547 160 aaKnown RBP23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 MYL10Q9BUA6 226 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 WDR11Q9BZH6 1224 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 ELP1O95163 1332 aa23.23■■□□□ 1.31
SHCBP1-203ENST00000564272 A0A0U1RQG5 324 aaPredicted RBP23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 OPLAHO14841 1288 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 DUSP28Q4G0W2 176 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 CASC1Q6TDU7 716 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 CXCL17Q6UXB2 119 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 ANKRD33Q7Z3H0 272 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 TAAR1Q96RJ0 339 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 PIGSQ96S52 555 aa23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 BAZ2BQ9UIF8 2168 aaKnown RBP23.22■■□□□ 1.31
SHCBP1-203ENST00000564272 RBM47A0AV96 593 aaKnown RBP23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 CYTH3O43739 400 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 CDC45O75419 566 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 ITGB8P26012 769 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 ZNF654Q8IZM8 581 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 TOX2Q96NM4 488 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 RIOX1Q9H6W3 641 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 Q9Y3F1 56 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 PCDHA1Q9Y5I3 950 aa23.21■■□□□ 1.31
SHCBP1-203ENST00000564272 SH2B2O14492 632 aaPredicted RBP23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 CFBP00751 764 aa23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 MCM5P33992 734 aa23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 FAAP100Q0VG06 881 aa23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 MAF1Q9H063 256 aa23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 TMEM39AQ9NV64 488 aa23.2■■□□□ 1.3
SHCBP1-203ENST00000564272 LAMA3Q16787 3333 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 DCDC2CA8MYV0 355 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 B4DLN1 442 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 ARVCFO00192 962 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 KIAA0355O15063 1070 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 CDK7P50613 346 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 MRPL12P52815 198 aaKnown RBP23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 PPP2R5BQ15173 497 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 LRIT3Q3SXY7 679 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 RMDN3Q96TC7 470 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 LRRC2Q9BYS8 371 aa23.19■■□□□ 1.3
SHCBP1-203ENST00000564272 MROH7Q68CQ1 1323 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 SZT2Q5T011 3432 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 ZEB2O60315 1214 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 DDAH1O94760 285 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms