RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 CLEC10AQ8IUN9 316 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 TP53INP1Q96A56 240 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 SSBP4Q9BWG4 385 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.18□□□□□ -1.12e-8■■■□□ 18.7
HERPUD1-208ENST00000563911 PRDM10Q9NQV6 1147 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 ZNF214Q9UL59 606 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 MSRB2Q9Y3D2 182 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
HERPUD1-208ENST00000563911 RGPD5Q99666 1765 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 WNK3Q9BYP7 1800 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 FAM221BA6H8Z2 402 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 SLITRK5O94991 958 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 RASA3Q14644 834 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 BBS9Q3SYG4 887 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 GIMAP7Q8NHV1 300 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 PPP1R13LQ8WUF5 828 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 PSMG3-AS1Q96PY0 264 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 FAM83CQ9BQN1 747 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 C1GALT1Q9NS00 363 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 PIK3C2AO00443 1686 aa8.17□□□□□ -1.1
HERPUD1-208ENST00000563911 EXOC5O00471 708 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 PDPK1O15530 556 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 TP53P04637 393 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 USP6P35125 1406 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 PMS1P54277 932 aaKnown RBP8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 RASSF7Q02833 373 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 IFRD2Q12894 506 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 ZNF746Q6NUN9 644 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 PNPLA7Q6ZV29 1317 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 TOP6BLQ8N6T0 577 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 STOML1Q9UBI4 398 aa8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 TMA7Q9Y2S6 64 aaKnown RBP8.16□□□□□ -1.1
HERPUD1-208ENST00000563911 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 HMX2A2RU54 273 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 ETV3P41162 512 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 TDRD10Q5VZ19 366 aaKnown RBP8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 DNAJB8Q8NHS0 232 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 KLHL6Q8WZ60 621 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 ZNF512BQ96KM6 892 aaPredicted RBP8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 TPX2Q9ULW0 747 aaKnown RBP8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
HERPUD1-208ENST00000563911 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 LEFTY1O75610 366 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 FAM87AP0C7U9 286 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 RASGRF1Q13972 1273 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 MRM1Q6IN84 353 aaKnown RBP8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 CCDC144CPQ8IYA2 1237 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 KREMEN1Q96MU8 473 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 DNAJC7Q99615 494 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 DUSP23Q9BVJ7 150 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 MKRN2Q9H000 416 aaKnown RBP8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
HERPUD1-208ENST00000563911 NFAT5O94916 1531 aa8.13□□□□□ -1.11
HERPUD1-208ENST00000563911 C9IYK1 514 aa8.13□□□□□ -1.11
HERPUD1-208ENST00000563911 MTERF2Q49AM1 385 aa8.13□□□□□ -1.11
HERPUD1-208ENST00000563911 PPFIBP1Q86W92 1011 aa8.13□□□□□ -1.11
HERPUD1-208ENST00000563911 BTAF1O14981 1849 aa8.13□□□□□ -1.11
HERPUD1-208ENST00000563911 TNS2Q63HR2 1409 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 TRPM1Q7Z4N2 1603 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 CYP7A1P22680 504 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 RNF4P78317 190 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 NBPF12Q5TAG4 269 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 HEATR6Q6AI08 1181 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 TUBGCP6Q96RT7 1819 aa8.12□□□□□ -1.11
HERPUD1-208ENST00000563911 NSD2O96028 1365 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 GDF11O95390 407 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 EOMESO95936 686 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 ADMP35318 185 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 AXDND1Q5T1B0 1012 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 PRR23CQ6ZRP0 262 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 AMIGO3Q86WK7 504 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 COL23A1Q86Y22 540 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 FBXL6Q8N531 539 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 DNAJC5GQ8N7S2 189 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 ST13P5Q8NFI4 369 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 PFDN2Q9UHV9 154 aa8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 MRPL42Q9Y6G3 142 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-208ENST00000563911 ADCY9O60503 1353 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 BRD4O60885 1362 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 CENPJQ9HC77 1338 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 SUSD5O60279 629 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 HSPA6P17066 643 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms