RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 MAP3K14Q99558 947 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 TMEM47Q9BQJ4 181 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 PSTPIP2Q9H939 334 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 TMEM132AQ24JP5 1023 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 MAATS1Q7Z4T9 603 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 CNOT6LQ96LI5 555 aaKnown RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
RNF40-204ENST00000563683 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
RNF40-204ENST00000563683 SMIM22K7EJ46 135 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
RNF40-204ENST00000563683 BMP6P22004 513 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 PPP1R2P41236 205 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 SSR1P43307 286 aaKnown RBP11.57□□□□□ -0.56
RNF40-204ENST00000563683 MNAT1P51948 309 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 MDM2Q00987 491 aaPredicted RBP11.57□□□□□ -0.56
RNF40-204ENST00000563683 NTRK3Q16288 839 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNF40-204ENST00000563683 LAMA4Q16363 1823 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 A6NNZ2 444 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
RNF40-204ENST00000563683 PPARDQ03181 441 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 TUBB8Q3ZCM7 444 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 FAM13AO94988 1023 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 PRCPP42785 496 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 ADGRA1Q86SQ6 560 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
RNF40-204ENST00000563683 TAX1BP1Q86VP1 789 aa11.57□□□□□ -0.56
RNF40-204ENST00000563683 TARSL2A2RTX5 802 aaKnown RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 ANKRD65E5RJM6 399 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 CETN3O15182 167 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 FGFR2P21802 821 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 SARSP49591 514 aaKnown RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 TOB1P50616 345 aaPredicted RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 USP14P54578 494 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 GRAPQ13588 217 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 PTPROQ16827 1216 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 RWDD2AQ9UIY3 292 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 CFBP00751 764 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 MAP2K2P36507 400 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 MMP14P50281 582 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 COG1Q8WTW3 980 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 ITIH6Q6UXX5 1313 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
RNF40-204ENST00000563683 TCP11X2Q5H9J9 407 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 HPCAL4Q9UM19 191 aa11.56□□□□□ -0.56
RNF40-204ENST00000563683 GOLGA6CA6NDK9 693 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 ZMYND10O75800 440 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 GOLGA6DP0CG33 693 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 CETN1Q12798 172 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 E2F4Q16254 413 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 PRR16Q569H4 304 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 GOLGA6AQ9NYA3 693 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 PCDHA1Q9Y5I3 950 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 PRPF6O94906 941 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 UBE2SQ16763 222 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 SLC9C1Q4G0N8 1177 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 ARL6IP4Q66PJ3 421 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 MYOCDQ8IZQ8 938 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 P2RX5Q93086 422 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 RABEP2Q9H5N1 569 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 TCRBV5S4A2TA0A5A2 114 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 IFFO1Q0D2I5 559 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 TROAPQ12815 778 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 SF3B3Q15393 1217 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 HS2ST1Q7LGA3 356 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 CD209Q9NNX6 404 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 KIAA1024Q9UPX6 916 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 BUB1O43683 1085 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 HSF2BPO75031 334 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 INPP5BP32019 993 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 RCAN1P53805 252 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms