RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ALDH5A1P51649 535 aaPredicted RBP23.52■■□□□ 1.36
CMTM3-206ENST00000563672 GHRHRQ02643 423 aa23.52■■□□□ 1.36
CMTM3-206ENST00000563672 MICU3Q86XE3 530 aa23.52■■□□□ 1.36
CMTM3-206ENST00000563672 SYTL5Q8TDW5 730 aaPredicted RBP23.52■■□□□ 1.36
CMTM3-206ENST00000563672 DDX49Q9Y6V7 483 aaKnown RBP23.52■■□□□ 1.36
CMTM3-206ENST00000563672 RARBP10826 455 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 CASTP20810 708 aaKnown RBP23.51■■□□□ 1.35
CMTM3-206ENST00000563672 Q6ZUG5 572 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 TMTC3Q6ZXV5 915 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 CMTR1Q8N1G2 835 aaKnown RBP23.51■■□□□ 1.35
CMTM3-206ENST00000563672 ARRDC4Q8NCT1 418 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 DNERQ8NFT8 737 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 HTATIP2Q9BUP3 242 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 AGXT2Q9BYV1 514 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 C11orf49Q9H6J7 331 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 ZSWIM6Q9HCJ5 1215 aa23.51■■□□□ 1.35
CMTM3-206ENST00000563672 BAZ2BQ9UIF8 2168 aaKnown RBP23.5■■□□□ 1.35
CMTM3-206ENST00000563672 KLF18A0A0U1RQI7 1052 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 DNM1LO00429 736 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 ZBTB43O43298 467 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 EDNRBP24530 442 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 RCAN1P53805 252 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 CCDC144BQ3MJ40 725 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
CMTM3-206ENST00000563672 TM6SF1Q9BZW5 370 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 XPNPEP3Q9NQH7 507 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 COL20A1Q9P218 1284 aa23.5■■□□□ 1.35
CMTM3-206ENST00000563672 LCTP09848 1927 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 HSD17B4P51659 736 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 FGD1P98174 961 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 SAMD3Q8N6K7 520 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 PIBF1Q8WXW3 757 aa23.49■■□□□ 1.35
CMTM3-206ENST00000563672 LENG1Q96BZ8 264 aaPredicted RBP23.49■■□□□ 1.35
CMTM3-206ENST00000563672 RBM28Q9NW13 759 aaKnown RBP23.49■■□□□ 1.35
CMTM3-206ENST00000563672 MAP3K20Q9NYL2 800 aaKnown RBP23.49■■□□□ 1.35
CMTM3-206ENST00000563672 ADCY6O43306 1168 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 DUSP11O75319 330 aaKnown RBP23.48■■□□□ 1.35
CMTM3-206ENST00000563672 CFBP00751 764 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 APOBRQ0VD83 1088 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 LRRC41Q15345 812 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 GJC2Q5T442 439 aaPredicted RBP23.48■■□□□ 1.35
CMTM3-206ENST00000563672 TAPT1Q6NXT6 567 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 BRF1Q92994 677 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 TAAR1Q96RJ0 339 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 VTA1Q9NP79 307 aa23.48■■□□□ 1.35
CMTM3-206ENST00000563672 FAM217BQ9NTX9 383 aaPredicted RBP23.48■■□□□ 1.35
CMTM3-206ENST00000563672 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
CMTM3-206ENST00000563672 FUT2Q10981 343 aa23.47■■□□□ 1.35
CMTM3-206ENST00000563672 RTN1Q16799 776 aa23.47■■□□□ 1.35
CMTM3-206ENST00000563672 EEPD1Q7L9B9 569 aa23.47■■□□□ 1.35
CMTM3-206ENST00000563672 FBXO16Q8IX29 292 aaPredicted RBP23.47■■□□□ 1.35
CMTM3-206ENST00000563672 SEC63Q9UGP8 760 aaKnown RBP23.47■■□□□ 1.35
CMTM3-206ENST00000563672 FRMPD3Q5JV73 1810 aa23.47■■□□□ 1.35
CMTM3-206ENST00000563672 MCM3APO60318 1980 aa23.47■■□□□ 1.35
CMTM3-206ENST00000563672 ADAMTS4O75173 837 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 PGK1P00558 417 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 PPP2R5BQ15173 497 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 CCDC82Q8N4S0 544 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 NSUN6Q8TEA1 469 aaKnown RBP23.46■■□□□ 1.35
CMTM3-206ENST00000563672 DPF3Q92784 378 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 MPHOSPH6Q99547 160 aaKnown RBP23.46■■□□□ 1.35
CMTM3-206ENST00000563672 PDGFCQ9NRA1 345 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 CYP46A1Q9Y6A2 500 aa23.46■■□□□ 1.35
CMTM3-206ENST00000563672 SYNRGQ9UMZ2 1314 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-206ENST00000563672 GOLGA8AA7E2F4 631 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 GOLGA8BA8MQT2 603 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 B4DLN1 442 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 SEC24BO95487 1268 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 CDC27P30260 824 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 ADCYAP1R1P41586 468 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 MRPL12P52815 198 aaKnown RBP23.45■■□□□ 1.34
CMTM3-206ENST00000563672 EVCP57679 992 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 TNFAIP2Q03169 654 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 IQSEC1Q6DN90 963 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 RNF180Q86T96 592 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 KLHDC9Q8NEP7 349 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 RMDN3Q96TC7 470 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 MYH6P13533 1939 aa23.45■■□□□ 1.34
CMTM3-206ENST00000563672 RBM47A0AV96 593 aaKnown RBP23.44■■□□□ 1.34
CMTM3-206ENST00000563672 KBTBD13C9JR72 458 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 GJA9P57773 515 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 ANAPC15P60006 121 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 NKX3-2P78367 333 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 PDE4DQ08499 809 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 IWS1Q96ST2 819 aa23.44■■□□□ 1.34
CMTM3-206ENST00000563672 SENP6Q9GZR1 1112 aaPredicted RBP23.44■■□□□ 1.34
CMTM3-206ENST00000563672 UPF3AQ9H1J1 476 aaKnown RBP23.44■■□□□ 1.34
CMTM3-206ENST00000563672 GNEQ9Y223 722 aaKnown RBP23.44■■□□□ 1.34
CMTM3-206ENST00000563672 NID2Q14112 1375 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 CNTNAP5Q8WYK1 1306 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 hCG_1642624A0A1W2PR95 340 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 GCOM1H8Y6P7 765 aaPredicted RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 MYCNP04198 464 aaPredicted RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 POLR2MP0CAP2 368 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 SMPD1P17405 629 aa23.43■■□□□ 1.34
CMTM3-206ENST00000563672 HOXA13P31271 388 aaPredicted RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 ADD1P35611 737 aaKnown RBP23.43■■□□□ 1.34
CMTM3-206ENST00000563672 METAP2P50579 478 aaKnown RBP eCLIP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms