RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 SNX14Q9Y5W7 946 aa32.86■■■□□ 2.85
NME3-203ENST00000563367 NR2E3Q9Y5X4 410 aa32.86■■■□□ 2.85
NME3-203ENST00000563367 SYNRGQ9UMZ2 1314 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.85■■■□□ 2.85
NME3-203ENST00000563367 OPLAHO14841 1288 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 DUSP11O75319 330 aaKnown RBP32.85■■■□□ 2.85
NME3-203ENST00000563367 SGMS1Q86VZ5 419 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 PDGFCQ9NRA1 345 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 PCDHA1Q9Y5I3 950 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 SLC12A7Q9Y666 1083 aa32.85■■■□□ 2.85
NME3-203ENST00000563367 CPA1P15085 419 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 KIF5BP33176 963 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 ADCYAP1R1P41586 468 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 IRX5P78411 483 aaPredicted RBP32.84■■■□□ 2.85
NME3-203ENST00000563367 TAPT1Q6NXT6 567 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 C7orf61Q8IZ16 206 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 SYTL5Q8TDW5 730 aaPredicted RBP32.84■■■□□ 2.85
NME3-203ENST00000563367 PIBF1Q8WXW3 757 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 MAF1Q9H063 256 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 COL20A1Q9P218 1284 aa32.84■■■□□ 2.85
NME3-203ENST00000563367 LOC102724159A0A0B4J2E5 919 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 PNMA6FA0A0J9YX94 578 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 PLEKHA8P1O95397 391 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 PWP2Q15269 919 aaKnown RBP32.83■■■□□ 2.85
NME3-203ENST00000563367 RNF180Q86T96 592 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 MCF2L2Q86YR7 1114 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 DNERQ8NFT8 737 aa32.83■■■□□ 2.85
NME3-203ENST00000563367 MYADML2A6NDP7 307 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 CALM1P0DP23 149 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 CALM2P0DP24 149 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 CALM3P0DP25 149 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 ATN1P54259 1190 aaPredicted RBP32.82■■■□□ 2.84
NME3-203ENST00000563367 TNFAIP2Q03169 654 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 CMTR1Q8N1G2 835 aaKnown RBP32.82■■■□□ 2.84
NME3-203ENST00000563367 SRBD1Q8N5C6 995 aaKnown RBP32.82■■■□□ 2.84
NME3-203ENST00000563367 KLHDC9Q8NEP7 349 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 FERMT2Q96AC1 680 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 TAAR1Q96RJ0 339 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 SPZ1Q9BXG8 430 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 VTA1Q9NP79 307 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 BRPF3Q9ULD4 1205 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 PHF24Q9UPV7 400 aa32.82■■■□□ 2.84
NME3-203ENST00000563367 PTGS1P23219 599 aa32.81■■■□□ 2.84
NME3-203ENST00000563367 EDNRBP24530 442 aa32.81■■■□□ 2.84
NME3-203ENST00000563367 TMEM63BQ5T3F8 832 aa32.81■■■□□ 2.84
NME3-203ENST00000563367 JAKMIP1Q96N16 626 aaKnown RBP32.81■■■□□ 2.84
NME3-203ENST00000563367 CFBP00751 764 aa32.8■■■□□ 2.84
NME3-203ENST00000563367 HMGB1P09429 215 aaKnown RBP32.8■■■□□ 2.84
NME3-203ENST00000563367 SMARCA1P28370 1054 aa32.8■■■□□ 2.84
NME3-203ENST00000563367 MICU3Q86XE3 530 aa32.8■■■□□ 2.84
NME3-203ENST00000563367 FANCBQ8NB91 859 aa32.8■■■□□ 2.84
NME3-203ENST00000563367 LZTS2Q9BRK4 669 aa32.8■■■□□ 2.84
NME3-203ENST00000563367 UPF3AQ9H1J1 476 aaKnown RBP32.8■■■□□ 2.84
NME3-203ENST00000563367 GNEQ9Y223 722 aaKnown RBP32.8■■■□□ 2.84
NME3-203ENST00000563367 SMPD1P17405 629 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 GNAQP50148 359 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 GJA9P57773 515 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 IQSEC1Q6DN90 963 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 CCSAPQ6IQ19 270 aaPredicted RBP32.79■■■□□ 2.84
NME3-203ENST00000563367 APOA5Q6Q788 366 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 USP26Q9BXU7 913 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 KIAA1217Q5T5P2 1943 aa32.79■■■□□ 2.84
NME3-203ENST00000563367 CTAGE5O15320 804 aa32.78■■■□□ 2.84
NME3-203ENST00000563367 HSD17B4P51659 736 aa32.78■■■□□ 2.84
NME3-203ENST00000563367 GHRHRQ02643 423 aa32.78■■■□□ 2.84
NME3-203ENST00000563367 PDE4DQ08499 809 aa32.78■■■□□ 2.84
NME3-203ENST00000563367 SLC39A5Q6ZMH5 540 aa32.78■■■□□ 2.84
NME3-203ENST00000563367 NOL8Q76FK4 1167 aaKnown RBP32.78■■■□□ 2.84
NME3-203ENST00000563367 EPB41L2O43491 1005 aaKnown RBP32.77■■■□□ 2.84
NME3-203ENST00000563367 C6orf222P0C671 652 aaPredicted RBP32.77■■■□□ 2.84
NME3-203ENST00000563367 KCNA10Q16322 511 aa32.77■■■□□ 2.84
NME3-203ENST00000563367 RRP36Q96EU6 259 aaKnown RBP32.77■■■□□ 2.84
NME3-203ENST00000563367 TSEN34Q9BSV6 310 aaKnown RBP32.77■■■□□ 2.84
NME3-203ENST00000563367 CST5P28325 142 aaPredicted RBP32.76■■■□□ 2.83
NME3-203ENST00000563367 ACLYP53396 1101 aa32.76■■■□□ 2.83
NME3-203ENST00000563367 TRAF1Q13077 416 aa32.76■■■□□ 2.83
NME3-203ENST00000563367 SYNE3Q6ZMZ3 975 aa32.76■■■□□ 2.83
NME3-203ENST00000563367 RMDN3Q96TC7 470 aa32.76■■■□□ 2.83
NME3-203ENST00000563367 MPHOSPH6Q99547 160 aaKnown RBP32.76■■■□□ 2.83
NME3-203ENST00000563367 ZMYND8Q9ULU4 1186 aaPredicted RBP32.76■■■□□ 2.83
NME3-203ENST00000563367 RBM47A0AV96 593 aaKnown RBP32.75■■■□□ 2.83
NME3-203ENST00000563367 HOXA13P31271 388 aaPredicted RBP32.75■■■□□ 2.83
NME3-203ENST00000563367 RTP1P59025 263 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 NKX3-2P78367 333 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 BLOC1S2Q6QNY1 142 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 TMTC3Q6ZXV5 915 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 NSUN6Q8TEA1 469 aaKnown RBP32.75■■■□□ 2.83
NME3-203ENST00000563367 SPC25Q9HBM1 224 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 PCDH10Q9P2E7 1040 aa32.75■■■□□ 2.83
NME3-203ENST00000563367 A0A1W2PQ45 241 aaPredicted RBP32.74■■■□□ 2.83
NME3-203ENST00000563367 A0A1W2PQY0 241 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 SYN1P17600 705 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 SNX17Q15036 470 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 Q6ZUG5 572 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 TLK2Q86UE8 772 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 CCDC82Q8N4S0 544 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 WDR11Q9BZH6 1224 aa32.74■■■□□ 2.83
NME3-203ENST00000563367 COLQQ9Y215 455 aaPredicted RBP32.74■■■□□ 2.83
NME3-203ENST00000563367 KLF18A0A0U1RQI7 1052 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 B4DLN1 442 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms