RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MSL3Q8N5Y2 521 aaKnown RBP9.92□□□□□ -0.82
UBR1-204ENST00000563239 MORC4Q8TE76 937 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 LZTS2Q9BRK4 669 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 AMNQ9BXJ7 453 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 UPF3BQ9BZI7 483 aaKnown RBP9.92□□□□□ -0.82
UBR1-204ENST00000563239 COL20A1Q9P218 1284 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 OGDHLQ9ULD0 1010 aa9.92□□□□□ -0.82
UBR1-204ENST00000563239 BAZ2BQ9UIF8 2168 aaKnown RBP9.92□□□□□ -0.82
UBR1-204ENST00000563239 DNAH12Q6ZR08 3092 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 PTPDC1A2A3K4 754 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 SEPT4O43236 478 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 ZBTB43O43298 467 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 GNAQP50148 359 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 RCAN1P53805 252 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 RTN1Q16799 776 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 ARMCX2Q7L311 632 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 SYTL5Q8TDW5 730 aaPredicted RBP9.91□□□□□ -0.82
UBR1-204ENST00000563239 PIBF1Q8WXW3 757 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 MAF1Q9H063 256 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
UBR1-204ENST00000563239 DDX20Q9UHI6 824 aaKnown RBP9.91□□□□□ -0.82
UBR1-204ENST00000563239 NRBP1Q9UHY1 535 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 MRPL11Q9Y3B7 192 aaKnown RBP9.91□□□□□ -0.82
UBR1-204ENST00000563239 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 CYP46A1Q9Y6A2 500 aa9.91□□□□□ -0.82
UBR1-204ENST00000563239 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 hCG_1642624A0A1W2PR95 340 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 GOLGA8AA7E2F4 631 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 ADCY6O43306 1168 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 TFRCP02786 760 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 EDNRBP24530 442 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 CALML3P27482 149 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 PDIA3P30101 505 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 ALDH5A1P51649 535 aaPredicted RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 HSD17B4P51659 736 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 NTRK3Q16288 839 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 ANO1Q5XXA6 986 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 SYNE3Q6ZMZ3 975 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 CCDC82Q8N4S0 544 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 DIS3LQ8TF46 1054 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 RRP36Q96EU6 259 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 TAAR1Q96RJ0 339 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 KIF2CQ99661 725 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 LARP6Q9BRS8 491 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 ALDH8A1Q9H2A2 487 aaPredicted RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
UBR1-204ENST00000563239 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.82
UBR1-204ENST00000563239 LRRC37A2A6NM11 1700 aa9.9□□□□□ -0.83
UBR1-204ENST00000563239 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 CUL9Q8IWT3 2517 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 ASB14A6NK59 587 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 CNGA1P29973 690 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 FGD1P98174 961 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 TMEM63BQ5T3F8 832 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 TAPT1Q6NXT6 567 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 LENG1Q96BZ8 264 aaPredicted RBP9.89□□□□□ -0.83
UBR1-204ENST00000563239 ABHD16BQ9H3Z7 469 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 MYH6P13533 1939 aa9.89□□□□□ -0.83
UBR1-204ENST00000563239 MCM3APO60318 1980 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 LOC102724159A0A0B4J2E5 919 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 MSCO60682 206 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 EIF5BO60841 1220 aaKnown RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 FARP2O94887 1054 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 CFBP00751 764 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 COL6A1P12109 1028 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 CAPN2P17655 700 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 PTGS1P23219 599 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 HOXA13P31271 388 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 METAP2P50579 478 aaKnown RBP eCLIP9.88□□□□□ -0.83
UBR1-204ENST00000563239 PPP2R5BQ15173 497 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 PWP2Q15269 919 aaKnown RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 CCDC144BQ3MJ40 725 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 WWC2Q6AWC2 1192 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 DNERQ8NFT8 737 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 ZNF274Q96GC6 653 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 NCOA5Q9HCD5 579 aaKnown RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 PDGFCQ9NRA1 345 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 ZHX1Q9UKY1 873 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 CNPY2Q9Y2B0 182 aa9.88□□□□□ -0.83
UBR1-204ENST00000563239 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
UBR1-204ENST00000563239 RBM47A0AV96 593 aaKnown RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 MEIS2O14770 477 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 CTAGE5O15320 804 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 ADAMTS4O75173 837 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 AKR1A1P14550 325 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 ADCYAP1R1P41586 468 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 AK2P54819 239 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 CCT2P78371 535 aaKnown RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
UBR1-204ENST00000563239 TRAF1Q13077 416 aa9.87□□□□□ -0.83
UBR1-204ENST00000563239 PKN1Q16512 942 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms