RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-208ENST00000563220 FLOT1O75955 427 aa20.46■□□□□ 0.87
COMMD4-208ENST00000563220 DHX58Q96C10 678 aa20.46■□□□□ 0.87
COMMD4-208ENST00000563220 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
COMMD4-208ENST00000563220 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 ICAM1P05362 532 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 PNOCQ13519 176 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 CRYGNQ8WXF5 182 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 DNAJC25Q9H1X3 360 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.45■□□□□ 0.86
COMMD4-208ENST00000563220 MRPL11Q9Y3B7 192 aaKnown RBP20.45■□□□□ 0.86
COMMD4-208ENST00000563220 IQCA1LA6NCM1 817 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 PP2D1A8MPX8 630 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 SLC38A10Q9HBR0 1119 aa20.45■□□□□ 0.86
COMMD4-208ENST00000563220 SMCHD1A6NHR9 2005 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 CFBP00751 764 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 FOSP01100 380 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-208ENST00000563220 USP11P51784 963 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 CALCRLQ16602 461 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 MCTP2Q6DN12 878 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 MOB2Q70IA6 237 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 TUBE1Q9UJT0 475 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 ABCB11O95342 1321 aa20.44■□□□□ 0.86
COMMD4-208ENST00000563220 SPDYE3A6NKU9 549 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 TECP42680 631 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 ARHGAP4P98171 946 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 E2F4Q16254 413 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 STX1AQ16623 288 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 GRAMD1CQ8IYS0 662 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 FAM200AQ8TCP9 573 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 RAVER2Q9HCJ3 691 aaKnown RBP20.43■□□□□ 0.86
COMMD4-208ENST00000563220 DDX25Q9UHL0 483 aaKnown RBP20.43■□□□□ 0.86
COMMD4-208ENST00000563220 CCPG1Q9ULG6 757 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 SLFN14P0C7P3 912 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 PRR29P0C7W0 189 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 TXKP42681 527 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 IREB2P48200 963 aaKnown RBP20.43■□□□□ 0.86
COMMD4-208ENST00000563220 C11orf57Q6ZUT1 292 aaPredicted RBP20.43■□□□□ 0.86
COMMD4-208ENST00000563220 FCHSD1Q86WN1 690 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 CPXCR1Q8N123 301 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 CBX8Q9HC52 389 aa20.43■□□□□ 0.86
COMMD4-208ENST00000563220 CYP3A7-CYP3A51PA0A087WV96 503 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 GCOM1H8Y6P7 765 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-208ENST00000563220 BIN1O00499 593 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 POLR2MP0CAP2 368 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 GCFC2P16383 781 aaKnown RBP20.42■□□□□ 0.86
COMMD4-208ENST00000563220 CYP3A7P24462 503 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 SREBF1P36956 1147 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 UVSSAQ2YD98 709 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 SH3D19Q5HYK7 790 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 HAS1Q92839 578 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 ANO10Q9NW15 660 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 PCDHA5Q9Y5H7 936 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 CSADQ9Y600 493 aa20.42■□□□□ 0.86
COMMD4-208ENST00000563220 POTEIP0CG38 1075 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 NF2P35240 595 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 KARSQ15046 597 aaKnown RBP20.41■□□□□ 0.86
COMMD4-208ENST00000563220 POSTNQ15063 836 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 KANK3Q6NY19 840 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 SH3RF1Q7Z6J0 888 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 PNMA8AQ86V59 439 aaPredicted RBP20.41■□□□□ 0.86
COMMD4-208ENST00000563220 TEX2Q8IWB9 1127 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 MBOAT7Q96N66 472 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 NAP1L4Q99733 375 aaKnown RBP20.41■□□□□ 0.86
COMMD4-208ENST00000563220 CCSER1Q9C0I3 900 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 TMOD4Q9NZQ9 345 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 PHIPQ8WWQ0 1821 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 VWA5AO00534 786 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 ZNF165P49910 485 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 IGSF22Q8N9C0 903 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 IQUBQ8NA54 791 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 CLEC4DQ8WXI8 215 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 CLMNQ96JQ2 1002 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 AK8Q96MA6 479 aa20.41■□□□□ 0.86
COMMD4-208ENST00000563220 ZBED4O75132 1171 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 DSG3P32926 999 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 UBA7P41226 1012 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 FXR2P51116 673 aaKnown RBP eCLIP20.4■□□□□ 0.86
COMMD4-208ENST00000563220 ISM2Q6H9L7 571 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 MOXD1Q6UVY6 613 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 LUZP1Q86V48 1076 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 GJA10Q969M2 543 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 USP25Q9UHP3 1055 aa20.4■□□□□ 0.86
COMMD4-208ENST00000563220 HOOK1Q9UJC3 728 aaKnown RBP20.4■□□□□ 0.86
COMMD4-208ENST00000563220 ALAS1P13196 640 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 TXLNAP40222 546 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 AFMP43652 599 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 NLRP12P59046 1061 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 DPCR1Q3MIW9 517 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 PDXDC2PQ6P474 469 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 CEP57L1Q8IYX8 460 aa20.39■□□□□ 0.86
COMMD4-208ENST00000563220 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.86
COMMD4-208ENST00000563220 ADAMTS5Q9UNA0 930 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms