RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 POLR2MP0CAP2 368 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 ADCY7P51828 1080 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 PRKCZQ05513 592 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 TRIM29Q14134 588 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 SLC30A10Q6XR72 485 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 PSTPIP2Q9H939 334 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 PRDM10Q9NQV6 1147 aa21.64■■□□□ 1.05
RAB40C-207ENST00000563109 MAP3K20Q9NYL2 800 aaKnown RBP21.64■■□□□ 1.05
RAB40C-207ENST00000563109 ESYT2A0FGR8 921 aa21.63■■□□□ 1.05
RAB40C-207ENST00000563109 FDPSP14324 419 aaKnown RBP21.63■■□□□ 1.05
RAB40C-207ENST00000563109 CALML3P27482 149 aa21.63■■□□□ 1.05
RAB40C-207ENST00000563109 RPS6P62753 249 aaKnown RBP21.63■■□□□ 1.05
RAB40C-207ENST00000563109 BAATQ14032 418 aaPredicted RBP21.63■■□□□ 1.05
RAB40C-207ENST00000563109 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
RAB40C-207ENST00000563109 TEX2Q8IWB9 1127 aa21.63■■□□□ 1.05
RAB40C-207ENST00000563109 APBA2Q99767 749 aa21.63■■□□□ 1.05
RAB40C-207ENST00000563109 C6orf50Q9HD87 102 aa21.63■■□□□ 1.05
RAB40C-207ENST00000563109 SMCO2A6NFE2 343 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 OPLAHO14841 1288 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 PGK2P07205 417 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 GNA11P29992 359 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 FLT3LGP49771 235 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 HSD17B4P51659 736 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 MRPL12P52815 198 aaKnown RBP21.62■■□□□ 1.05
RAB40C-207ENST00000563109 NLRP5P59047 1200 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 CAP1Q01518 475 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 TYW1BQ6NUM6 668 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 RAET1EQ8TD07 263 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 BICD2Q8TD16 824 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 INTS4Q96HW7 963 aaKnown RBP21.62■■□□□ 1.05
RAB40C-207ENST00000563109 AIFM3Q96NN9 605 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 GJD2Q9UKL4 321 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 GABRQQ9UN88 632 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 LCTP09848 1927 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 PCNTO95613 3336 aa21.62■■□□□ 1.05
RAB40C-207ENST00000563109 CYP2B6P20813 491 aa21.61■■□□□ 1.05
RAB40C-207ENST00000563109 GJB2P29033 226 aa21.61■■□□□ 1.05
RAB40C-207ENST00000563109 ANP32AP39687 249 aaKnown RBP21.61■■□□□ 1.05
RAB40C-207ENST00000563109 GHRHRQ02643 423 aa21.61■■□□□ 1.05
RAB40C-207ENST00000563109 ZMYND12Q9H0C1 365 aa21.61■■□□□ 1.05
RAB40C-207ENST00000563109 DNAJC25-GNG10A0A024R161 153 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 PIK3CDO00329 1044 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 HOXA13P31271 388 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-207ENST00000563109 FOSBP53539 338 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 IRF5Q13568 498 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
RAB40C-207ENST00000563109 USP6NLQ92738 828 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 C8orf76Q96K31 380 aa21.6■■□□□ 1.05
RAB40C-207ENST00000563109 MPHOSPH6Q99547 160 aaKnown RBP21.6■■□□□ 1.05
RAB40C-207ENST00000563109 ADD3Q9UEY8 706 aaKnown RBP21.6■■□□□ 1.05
RAB40C-207ENST00000563109 DIS3Q9Y2L1 958 aaKnown RBP21.6■■□□□ 1.05
RAB40C-207ENST00000563109 COBLO75128 1261 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 HOXC6P09630 235 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 XRCC5P13010 732 aaKnown RBP21.59■■□□□ 1.05
RAB40C-207ENST00000563109 GALNT17Q6IS24 598 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 FAM133AQ8N9E0 248 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 SYTL5Q8TDW5 730 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-207ENST00000563109 TBC1D5Q92609 795 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 BRMS1Q9HCU9 246 aa21.59■■□□□ 1.05
RAB40C-207ENST00000563109 SPDYE3A6NKU9 549 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 B4DLN1 442 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 CNTN2Q02246 1040 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 PKN2Q16513 984 aaKnown RBP21.58■■□□□ 1.05
RAB40C-207ENST00000563109 UBE2SQ16763 222 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 ZNF792Q3KQV3 632 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 USP17L6PQ6QN14 398 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 FCHSD1Q86WN1 690 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 REXO1Q8N1G1 1221 aaKnown RBP21.58■■□□□ 1.05
RAB40C-207ENST00000563109 DNERQ8NFT8 737 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 EHMT1Q9H9B1 1298 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 FOXD4L1Q9NU39 408 aa21.58■■□□□ 1.05
RAB40C-207ENST00000563109 MEIS2O14770 477 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 ZNF467Q7Z7K2 595 aaPredicted RBP21.57■■□□□ 1.04
RAB40C-207ENST00000563109 SLAIN1Q8ND83 568 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 NPLOC4Q8TAT6 608 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 MAML3Q96JK9 1138 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 PHF20Q9BVI0 1012 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 PCDHA4Q9UN74 947 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 KCNJ14Q9UNX9 436 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 PTPN22Q9Y2R2 807 aa21.57■■□□□ 1.04
RAB40C-207ENST00000563109 ADCY3O60266 1144 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 FOSP01100 380 aaPredicted RBP21.56■■□□□ 1.04
RAB40C-207ENST00000563109 AP3B2Q13367 1082 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 SAFBQ15424 915 aaKnown RBP eCLIP21.56■■□□□ 1.04
RAB40C-207ENST00000563109 ARHGEF16Q5VV41 709 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 OLFML2BQ68BL8 750 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 BLIDQ8IZY5 108 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 DAGLBQ8NCG7 672 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
RAB40C-207ENST00000563109 SHISA4Q96DD7 197 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 RMDN3Q96TC7 470 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 PTCH2Q9Y6C5 1203 aa21.56■■□□□ 1.04
RAB40C-207ENST00000563109 LOC102724159A0A0B4J2E5 919 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 SOWAHBA6NEL2 793 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 ASB14A6NK59 587 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 PDCP20941 246 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms