RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 KIAA0355O15063 1070 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 DYNC1LI2O43237 492 aaPredicted RBP18.4■□□□□ 0.54
SF3B3-203ENST00000562874 CYP21A2P08686 494 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
SF3B3-203ENST00000562874 EPHB4P54760 987 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 FSCN1Q16658 493 aaKnown RBP18.4■□□□□ 0.54
SF3B3-203ENST00000562874 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
SF3B3-203ENST00000562874 ANKRD33Q7Z3H0 272 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 SKAP1Q86WV1 359 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 ADGRF4Q8IZF3 695 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 STAG2Q8N3U4 1231 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
SF3B3-203ENST00000562874 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 SEC23AQ15436 765 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 ANKS1AQ92625 1134 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 AP5M1Q9H0R1 490 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 VAT1LQ9HCJ6 419 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 ELP1O95163 1332 aa18.39■□□□□ 0.53
SF3B3-203ENST00000562874 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
SF3B3-203ENST00000562874 ARVCFO00192 962 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 NT5C2P49902 561 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 PSMC6P62333 389 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 PDE4DQ08499 809 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 STOX1Q6ZVD7 989 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 CHST3Q7LGC8 479 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 FAM126BQ8IXS8 530 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 FAM161BQ96MY7 647 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 PPP1R12CQ9BZL4 782 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
SF3B3-203ENST00000562874 COL6A3P12111 3177 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 SGSM2O43147 1006 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 CDK7P50613 346 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 NKX3-2P78367 333 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 FPGSQ05932 587 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 IQSEC1Q6DN90 963 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 JMJD4Q9H9V9 463 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 ABCB11O95342 1321 aa18.37■□□□□ 0.53
SF3B3-203ENST00000562874 TRDNQ13061 729 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 OR6J1Q8NGC5 347 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 PPP1R13LQ8WUF5 828 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 COPS5Q92905 334 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
SF3B3-203ENST00000562874 PNMA2Q9UL42 364 aa18.36■□□□□ 0.53
SF3B3-203ENST00000562874 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
SF3B3-203ENST00000562874 GRIN2DO15399 1336 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 E7EWF7 191 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 EDNRBP24530 442 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 DUSP28Q4G0W2 176 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
SF3B3-203ENST00000562874 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 MTMR10Q9NXD2 777 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 MAD2L2Q9UI95 211 aa18.35■□□□□ 0.53
SF3B3-203ENST00000562874 MYO9BQ13459 2157 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 UMODL1Q5DID0 1318 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
SF3B3-203ENST00000562874 TLR3O15455 904 aaKnown RBP18.34■□□□□ 0.53
SF3B3-203ENST00000562874 TIMP1P01033 207 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 PPP2R5BQ15173 497 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 HOMER1Q86YM7 354 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
SF3B3-203ENST00000562874 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
SF3B3-203ENST00000562874 TET1Q8NFU7 2136 aa18.34■□□□□ 0.53
SF3B3-203ENST00000562874 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 KLRF2D3W0D1 207 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 ZEB2O60315 1214 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 PPP1R11O60927 126 aaPredicted RBP18.33■□□□□ 0.52
SF3B3-203ENST00000562874 ARIH2O95376 493 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 MYL3P08590 195 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 ANTXR2P58335 489 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.52
SF3B3-203ENST00000562874 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 GUCD1Q96NT3 240 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 MPHOSPH6Q99547 160 aaKnown RBP18.33■□□□□ 0.52
SF3B3-203ENST00000562874 Q9Y3F1 56 aa18.33■□□□□ 0.52
SF3B3-203ENST00000562874 RBM47A0AV96 593 aaKnown RBP18.32■□□□□ 0.52
SF3B3-203ENST00000562874 OPLAHO14841 1288 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 B4GALT4O60513 344 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 CABYRO75952 493 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 CFBP00751 764 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 CD4P01730 458 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 ACRP10323 421 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 EIF2AK2P19525 551 aaKnown RBP18.32■□□□□ 0.52
SF3B3-203ENST00000562874 CYP2C18P33260 490 aa18.32■□□□□ 0.52
SF3B3-203ENST00000562874 GRM4Q14833 912 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms