RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
CMTM3-205ENST00000562707 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
CMTM3-205ENST00000562707 PNMA2Q9UL42 364 aa19.55■□□□□ 0.72
CMTM3-205ENST00000562707 CDH23Q9H251 3354 aa19.55■□□□□ 0.72
CMTM3-205ENST00000562707 MYH4Q9Y623 1939 aa19.55■□□□□ 0.72
CMTM3-205ENST00000562707 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 FGRP09769 529 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 CPT1AP50416 773 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 CCDC85BQ15834 202 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-205ENST00000562707 BRDTQ58F21 947 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-205ENST00000562707 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 MPHOSPH6Q99547 160 aaKnown RBP19.54■□□□□ 0.72
CMTM3-205ENST00000562707 TMEM47Q9BQJ4 181 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 WNT8AQ9H1J5 351 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 ALDH8A1Q9H2A2 487 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-205ENST00000562707 THEGQ9P2T0 379 aa19.54■□□□□ 0.72
CMTM3-205ENST00000562707 VCANP13611 3396 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 FRMPD2Q68DX3 1309 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-205ENST00000562707 ZBBXA8MT70 800 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 TNFRSF10AO00220 468 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 NFIBO00712 420 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 MYL3P08590 195 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 CALML3P27482 149 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 ADGRE1Q14246 886 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 TCP11L1Q9NUJ3 509 aa19.53■□□□□ 0.72
CMTM3-205ENST00000562707 YBX2Q9Y2T7 364 aaKnown RBP19.53■□□□□ 0.72
CMTM3-205ENST00000562707 PRUNE2Q8WUY3 3088 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 FGAP02671 866 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 PFKMP08237 780 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 PDE4DQ08499 809 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 RNF207Q6ZRF8 634 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 SCLYQ96I15 445 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 ASB2Q96Q27 587 aa19.52■□□□□ 0.72
CMTM3-205ENST00000562707 MTG1Q9BT17 334 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-205ENST00000562707 TNKSO95271 1327 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
CMTM3-205ENST00000562707 CYP2C9P11712 490 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 RABGGTBP53611 331 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 MRPS5P82675 430 aaKnown RBP19.51■□□□□ 0.71
CMTM3-205ENST00000562707 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
CMTM3-205ENST00000562707 MCMDC2Q4G0Z9 681 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 FAM47CQ5HY64 1035 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 PPP2R2DQ66LE6 453 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 IL27Q8NEV9 243 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 TTC14Q96N46 770 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 TSPYL2Q9H2G4 693 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-205ENST00000562707 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
CMTM3-205ENST00000562707 PCDHA11Q9Y5I1 949 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 RAD50Q92878 1312 aa19.51■□□□□ 0.71
CMTM3-205ENST00000562707 B4DLN1 442 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 NKRFO15226 690 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■□□ 16.7
CMTM3-205ENST00000562707 KPNA6O60684 536 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 PDHBP11177 359 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
CMTM3-205ENST00000562707 MRPL12P52815 198 aaKnown RBP19.5■□□□□ 0.71
CMTM3-205ENST00000562707 SLC30A10Q6XR72 485 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 TICAM2Q86XR7 235 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 CLEC4DQ8WXI8 215 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 FAM227BQ96M60 508 aa19.5■□□□□ 0.71
CMTM3-205ENST00000562707 ACTN1P12814 892 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 PDE1AP54750 535 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 MFSD6Q6ZSS7 791 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 DEFB128Q7Z7B8 93 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 RETREG2Q8NC44 543 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 DNERQ8NFT8 737 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 SCFD2Q8WU76 684 aa19.49■□□□□ 0.71
CMTM3-205ENST00000562707 MCM3APO60318 1980 aa19.48■□□□□ 0.71
CMTM3-205ENST00000562707 HSPD1P10809 573 aaKnown RBP19.48■□□□□ 0.71
CMTM3-205ENST00000562707 PCP11498 1178 aaKnown RBP19.48■□□□□ 0.71
CMTM3-205ENST00000562707 RPS6P62753 249 aaKnown RBP19.48■□□□□ 0.71
CMTM3-205ENST00000562707 ZNF543Q08ER8 600 aa19.48■□□□□ 0.71
CMTM3-205ENST00000562707 NBPF20Q3BBV1 942 aa19.48■□□□□ 0.71
CMTM3-205ENST00000562707 WDR19Q8NEZ3 1342 aa19.48■□□□□ 0.71
CMTM3-205ENST00000562707 A0A0D9SFI3 127 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 MYOGP15173 224 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 RFC2P35250 354 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 HAND2P61296 217 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 TTLL4Q14679 1199 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 TMEM67Q5HYA8 995 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 NFRKBQ6P4R8 1299 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 VWCEQ96DN2 955 aa19.47■□□□□ 0.71
CMTM3-205ENST00000562707 A6NJR5 290 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 TXNP10599 105 aaKnown RBP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 EDNRBP24530 442 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 PTPN11Q06124 597 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 MICALL1Q8N3F8 863 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 ADAMTS19Q8TE59 1207 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 FTOQ9C0B1 505 aaKnown RBP eCLIP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 NOD1Q9Y239 953 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 ZMYM6O95789 1325 aa19.46■□□□□ 0.71
CMTM3-205ENST00000562707 SPTBN5Q9NRC6 3674 aaKnown RBP19.46■□□□□ 0.71
CMTM3-205ENST00000562707 TRIM6-TRIM34B2RNG4 842 aa19.45■□□□□ 0.7
CMTM3-205ENST00000562707 PITPNM1O00562 1244 aa19.45■□□□□ 0.7
CMTM3-205ENST00000562707 SNHG28P0DPA3 235 aa19.45■□□□□ 0.7
CMTM3-205ENST00000562707 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms