RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MAP2K5Q13163 448 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 CHST13Q8NET6 341 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 NPLOC4Q8TAT6 608 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 AIFM3Q96NN9 605 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 GBP4Q96PP9 640 aa25.83■■□□□ 1.72
SYNGR3-202ENST00000562045 ELNP15502 786 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 XBP1P17861 261 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 COPB2P35606 906 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 CCL14Q16627 93 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 CLEC17AQ6ZS10 378 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 FBXO11Q86XK2 927 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 RAET1EQ8TD07 263 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 ACAD9Q9H845 621 aa25.82■■□□□ 1.72
SYNGR3-202ENST00000562045 STRNO43815 780 aa25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 PKN1Q16512 942 aa25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 PKN2Q16513 984 aaKnown RBP25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 SH3TC2Q8TF17 1288 aa25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 SOCS4Q8WXH5 440 aa25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 A1CFQ9NQ94 594 aaKnown RBP25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 FLRT1Q9NZU1 646 aa25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 RBBP6Q7Z6E9 1792 aaKnown RBP25.81■■□□□ 1.72
SYNGR3-202ENST00000562045 PNMA6FA0A0J9YX94 578 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 PRMT2P55345 433 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 IRF5Q13568 498 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 KCTD2Q14681 263 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 TKFCQ3LXA3 575 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 ABRAQ8N0Z2 381 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 TBC1D5Q92609 795 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 OPLAHO14841 1288 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 ADCY3O60266 1144 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 GUCY1B3Q02153 619 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 PFKFB3Q16875 520 aaPredicted RBP25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.8■■□□□ 1.722e-6■■■■□ 25.5
SYNGR3-202ENST00000562045 TRIB2Q92519 343 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 PURBQ96QR8 312 aaKnown RBP25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 AMNQ9BXJ7 453 aa25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 ZSCAN16Q9H4T2 348 aaPredicted RBP25.8■■□□□ 1.72
SYNGR3-202ENST00000562045 SCG2P13521 617 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 RGS2P41220 211 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 TRIM32Q13049 653 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 KRT40Q6A162 431 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 ANKRD35Q8N283 1001 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 RRP36Q96EU6 259 aaKnown RBP25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 FBXO40Q9UH90 709 aa25.79■■□□□ 1.72
SYNGR3-202ENST00000562045 DNAJC25-GNG10A0A024R161 153 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 NSMFQ6X4W1 530 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 DPP9Q86TI2 863 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 FERMT3Q86UX7 667 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 APBA2Q99767 749 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 PCDHA1Q9Y5I3 950 aa25.78■■□□□ 1.72
SYNGR3-202ENST00000562045 HOXC6P09630 235 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 CNTN2Q02246 1040 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 SLC30A10Q6XR72 485 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 FGD4Q96M96 766 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 GJB4Q9NTQ9 266 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 CYP39A1Q9NYL5 469 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 SEC63Q9UGP8 760 aaKnown RBP25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 ABCB11O95342 1321 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 ZNF792Q3KQV3 632 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 MCTP1Q6DN14 999 aa25.77■■□□□ 1.72
SYNGR3-202ENST00000562045 ASTN1O14525 1302 aa25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 BAG4O95429 457 aaKnown RBP25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 XRCC5P13010 732 aaKnown RBP25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 GRK4P32298 578 aa25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 RESTQ13127 1097 aa25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 GPKOWQ92917 476 aaPredicted RBP eCLIP25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 MCM3APO60318 1980 aa25.76■■□□□ 1.71
SYNGR3-202ENST00000562045 BAATQ14032 418 aaPredicted RBP25.75■■□□□ 1.71
SYNGR3-202ENST00000562045 DDX49Q9Y6V7 483 aaKnown RBP25.75■■□□□ 1.71
SYNGR3-202ENST00000562045 IGHA2P01877 340 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 MMP1P03956 469 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 SAFBQ15424 915 aaKnown RBP eCLIP25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 SLC9C1Q4G0N8 1177 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 TNS4Q8IZW8 715 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 PXYLP1Q8TE99 480 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 MAML3Q96JK9 1138 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 SH3GLB2Q9NR46 395 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 VPS54Q9P1Q0 977 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 MYCP01106 439 aaPredicted RBP25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 NFKBIBQ15653 356 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 TYW1BQ6NUM6 668 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 FAM177A1Q8N128 213 aaPredicted RBP25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 FAM133AQ8N9E0 248 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 SLAIN1Q8ND83 568 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 PNMA2Q9UL42 364 aa25.74■■□□□ 1.71
SYNGR3-202ENST00000562045 SOWAHBA6NEL2 793 aa25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 hCG_1984214I3L0E3 225 aa25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 RPS6P62753 249 aaKnown RBP25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 WWC2Q6AWC2 1192 aa25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 ZNF713Q8N859 430 aaPredicted RBP25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 MRPL11Q9Y3B7 192 aaKnown RBP25.73■■□□□ 1.71
SYNGR3-202ENST00000562045 CALML3P27482 149 aa25.72■■□□□ 1.71
SYNGR3-202ENST00000562045 RNF207Q6ZRF8 634 aa25.72■■□□□ 1.71
SYNGR3-202ENST00000562045 COL20A1Q9P218 1284 aa25.72■■□□□ 1.71
SYNGR3-202ENST00000562045 KCNJ14Q9UNX9 436 aa25.72■■□□□ 1.71
SYNGR3-202ENST00000562045 PFASO15067 1338 aa25.72■■□□□ 1.71
SYNGR3-202ENST00000562045 GOLGA6L22H0YM25 854 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 INHAP05111 366 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 CYP2C19P33261 490 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 GNL2Q13823 731 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms