RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 USH1GQ495M9 461 aa27.42■■□□□ 1.98
TMEM170A-202ENST00000561878 IFIT1BQ5T764 474 aaKnown RBP27.42■■□□□ 1.98
TMEM170A-202ENST00000561878 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
TMEM170A-202ENST00000561878 B4DLN1 442 aa27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 TLR3O15455 904 aaKnown RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 DYNC1LI2O43237 492 aaPredicted RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 PARP1P09874 1014 aaKnown RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 CHMLP26374 656 aa27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 CDK7P50613 346 aa27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 MRPL12P52815 198 aaKnown RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 RPS6P62753 249 aaKnown RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 CDC37Q16543 378 aaPredicted RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 DNERQ8NFT8 737 aa27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 MAF1Q9H063 256 aa27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 U3KPZ7 1027 aaPredicted RBP27.41■■□□□ 1.98
TMEM170A-202ENST00000561878 ITGB8P26012 769 aa27.4■■□□□ 1.98
TMEM170A-202ENST00000561878 ADGRF4Q8IZF3 695 aa27.4■■□□□ 1.98
TMEM170A-202ENST00000561878 RGS22Q8NE09 1264 aa27.4■■□□□ 1.98
TMEM170A-202ENST00000561878 CPVLQ9H3G5 476 aa27.4■■□□□ 1.98
TMEM170A-202ENST00000561878 ABCB11O95342 1321 aa27.4■■□□□ 1.98
TMEM170A-202ENST00000561878 DHX16O60231 1041 aaKnown RBP27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 FPGSQ05932 587 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 PDE4DQ08499 809 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 DUSP28Q4G0W2 176 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 C9orf50Q5SZB4 431 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 Q7L0L9 218 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 SEZ6LQ9BYH1 1024 aa27.39■■□□□ 1.98
TMEM170A-202ENST00000561878 MYH6P13533 1939 aa27.38■■□□□ 1.97
TMEM170A-202ENST00000561878 FAM109BQ6ICB4 259 aaPredicted RBP27.38■■□□□ 1.97
TMEM170A-202ENST00000561878 CXCL17Q6UXB2 119 aa27.38■■□□□ 1.97
TMEM170A-202ENST00000561878 TBX21Q9UL17 535 aa27.38■■□□□ 1.97
TMEM170A-202ENST00000561878 TIMP1P01033 207 aa27.37■■□□□ 1.97
TMEM170A-202ENST00000561878 FAM126BQ8IXS8 530 aa27.37■■□□□ 1.97
TMEM170A-202ENST00000561878 WDR11Q9BZH6 1224 aa27.37■■□□□ 1.97
TMEM170A-202ENST00000561878 RBM47A0AV96 593 aaKnown RBP27.36■■□□□ 1.97
TMEM170A-202ENST00000561878 SEC23AQ15436 765 aa27.36■■□□□ 1.97
TMEM170A-202ENST00000561878 MCF2L2Q86YR7 1114 aa27.36■■□□□ 1.97
TMEM170A-202ENST00000561878 MTMR10Q9NXD2 777 aa27.36■■□□□ 1.97
TMEM170A-202ENST00000561878 ERICH2A1L162 156 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 CYP21A2P08686 494 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 EDNRBP24530 442 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 PTH1RQ03431 593 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 ITGA7Q13683 1181 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 QRICH1Q2TAL8 776 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 CYB5R4Q7L1T6 521 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 RALYLQ86SE5 291 aaKnown RBP27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 FBXO11Q86XK2 927 aa27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 RNPC3Q96LT9 517 aaKnown RBP27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 MRPL11Q9Y3B7 192 aaKnown RBP27.35■■□□□ 1.97
TMEM170A-202ENST00000561878 NKRFO15226 690 aaKnown RBP eCLIP27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 SGSM2O43147 1006 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 CPT1AP50416 773 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 PPP2R5BQ15173 497 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 MFSD5Q6N075 450 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 SLC43A3Q8NBI5 491 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 SCFD2Q8WU76 684 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 JMJD4Q9H9V9 463 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 VAT1LQ9HCJ6 419 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 POLR3EQ9NVU0 708 aa27.34■■□□□ 1.97
TMEM170A-202ENST00000561878 PTGS1P23219 599 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 SMAD3P84022 425 aaKnown RBP27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 SART3Q15020 963 aaKnown RBP27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 BRDTQ58F21 947 aaPredicted RBP27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 TMEM63BQ5T3F8 832 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 ZNF697Q5TEC3 545 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 OR6J1Q8NGC5 347 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 NCOA7Q8NI08 942 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 STXBP5LQ9Y2K9 1186 aa27.33■■□□□ 1.97
TMEM170A-202ENST00000561878 CD4P01730 458 aa27.32■■□□□ 1.96
TMEM170A-202ENST00000561878 EPHB4P54760 987 aa27.32■■□□□ 1.96
TMEM170A-202ENST00000561878 PPIGQ13427 754 aaKnown RBP eCLIP27.32■■□□□ 1.96
TMEM170A-202ENST00000561878 TMEM199Q8N511 208 aa27.32■■□□□ 1.96
TMEM170A-202ENST00000561878 KLRF2D3W0D1 207 aa27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 IFIT3O14879 490 aaKnown RBP27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 STAG2Q8N3U4 1231 aa27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 NSUN6Q8TEA1 469 aaKnown RBP27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 AMNQ9BXJ7 453 aa27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 GPHNQ9NQX3 736 aaPredicted RBP27.31■■□□□ 1.96
TMEM170A-202ENST00000561878 E7EWF7 191 aa27.3■■□□□ 1.96
TMEM170A-202ENST00000561878 SYTL5Q8TDW5 730 aaPredicted RBP27.3■■□□□ 1.96
TMEM170A-202ENST00000561878 PPP1R12CQ9BZL4 782 aa27.3■■□□□ 1.96
TMEM170A-202ENST00000561878 TTLL4Q14679 1199 aa27.29■■□□□ 1.96
TMEM170A-202ENST00000561878 WTAPQ15007 396 aa27.29■■□□□ 1.96
TMEM170A-202ENST00000561878 MAP4K1Q92918 833 aa27.29■■□□□ 1.96
TMEM170A-202ENST00000561878 IWS1Q96ST2 819 aa27.29■■□□□ 1.96
TMEM170A-202ENST00000561878 MAD2L2Q9UI95 211 aa27.29■■□□□ 1.96
TMEM170A-202ENST00000561878 GRIN2DO15399 1336 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 PALM3A6NDB9 673 aaPredicted RBP27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 ZBTB5O15062 677 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 MYL3P08590 195 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 TXNP10599 105 aaKnown RBP27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 PSMC6P62333 389 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 TRAF1Q13077 416 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 TBC1D5Q92609 795 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 TAAR1Q96RJ0 339 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 RMDN3Q96TC7 470 aa27.28■■□□□ 1.96
TMEM170A-202ENST00000561878 KPNA6O60684 536 aa27.27■■□□□ 1.96
TMEM170A-202ENST00000561878 PURAQ00577 322 aaKnown RBP27.27■■□□□ 1.96
TMEM170A-202ENST00000561878 GRM4Q14833 912 aa27.27■■□□□ 1.96
TMEM170A-202ENST00000561878 MTMR8Q96EF0 704 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms