RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TOX2Q96NM4 488 aa12.04□□□□□ -0.48
CLK3-205ENST00000561673 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
CLK3-205ENST00000561673 ADD3Q9UEY8 706 aaKnown RBP12.04□□□□□ -0.48
CLK3-205ENST00000561673 ELP1O95163 1332 aa12.04□□□□□ -0.48
CLK3-205ENST00000561673 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
CLK3-205ENST00000561673 DCDC2CA8MYV0 355 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 KIAA0355O15063 1070 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 SGSM2O43147 1006 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 CYP21A2P08686 494 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
CLK3-205ENST00000561673 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
CLK3-205ENST00000561673 SEC23AQ15436 765 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
CLK3-205ENST00000561673 USH1GQ495M9 461 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 ASPRV1Q53RT3 343 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
CLK3-205ENST00000561673 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 TLK2Q86UE8 772 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 VTA1Q9NP79 307 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 TAF6LQ9Y6J9 622 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 A0A0C4DFX4 3053 aa12.03□□□□□ -0.48
CLK3-205ENST00000561673 LOC102724159A0A0B4J2E5 919 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 ARVCFO00192 962 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 TRDNQ13061 729 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 PWP2Q15269 919 aaKnown RBP12.02□□□□□ -0.49
CLK3-205ENST00000561673 SHHQ15465 462 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 FSCN1Q16658 493 aaKnown RBP12.02□□□□□ -0.49
CLK3-205ENST00000561673 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 Q7L0L9 218 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 RGS22Q8NE09 1264 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 TBC1D5Q92609 795 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 JMJD4Q9H9V9 463 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 VAT1LQ9HCJ6 419 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 Q9Y3F1 56 aa12.02□□□□□ -0.49
CLK3-205ENST00000561673 MCM3APO60318 1980 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 A0A0U1RQG5 324 aaPredicted RBP12.01□□□□□ -0.49
CLK3-205ENST00000561673 RBM47A0AV96 593 aaKnown RBP12.01□□□□□ -0.49
CLK3-205ENST00000561673 E7EWF7 191 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 RAG1P15918 1043 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 EDNRBP24530 442 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 DUSP28Q4G0W2 176 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 MAD2L2Q9UI95 211 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
CLK3-205ENST00000561673 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
CLK3-205ENST00000561673 KLRF2D3W0D1 207 aa12□□□□□ -0.49
CLK3-205ENST00000561673 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
CLK3-205ENST00000561673 ZEB2O60315 1214 aa12□□□□□ -0.49
CLK3-205ENST00000561673 CABYRO75952 493 aa12□□□□□ -0.49
CLK3-205ENST00000561673 TIMP1P01033 207 aa12□□□□□ -0.49
CLK3-205ENST00000561673 EPHB4P54760 987 aa12□□□□□ -0.49
CLK3-205ENST00000561673 PDE4DQ08499 809 aa12□□□□□ -0.49
CLK3-205ENST00000561673 STOX1Q6ZVD7 989 aa12□□□□□ -0.49
CLK3-205ENST00000561673 CHST3Q7LGC8 479 aa12□□□□□ -0.49
CLK3-205ENST00000561673 FBXO11Q86XK2 927 aa12□□□□□ -0.49
CLK3-205ENST00000561673 SLC43A3Q8NBI5 491 aa12□□□□□ -0.49
CLK3-205ENST00000561673 SENP2Q9HC62 589 aa12□□□□□ -0.49
CLK3-205ENST00000561673 TBX21Q9UL17 535 aa12□□□□□ -0.49
CLK3-205ENST00000561673 GRIN2DO15399 1336 aa12□□□□□ -0.49
CLK3-205ENST00000561673 ABCB11O95342 1321 aa12□□□□□ -0.49
CLK3-205ENST00000561673 LTBP2Q14767 1821 aa12□□□□□ -0.49
CLK3-205ENST00000561673 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 CDH23Q9H251 3354 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
CLK3-205ENST00000561673 CD4P01730 458 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 NCOA7Q8NI08 942 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 SYTL5Q8TDW5 730 aaPredicted RBP11.99□□□□□ -0.49
CLK3-205ENST00000561673 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 MPHOSPH6Q99547 160 aaKnown RBP11.99□□□□□ -0.49
CLK3-205ENST00000561673 MAF1Q9H063 256 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 MTMR10Q9NXD2 777 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 MRPL11Q9Y3B7 192 aaKnown RBP11.99□□□□□ -0.49
CLK3-205ENST00000561673 LCTP09848 1927 aa11.99□□□□□ -0.49
CLK3-205ENST00000561673 B4DLN1 442 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 PPP1R11O60927 126 aaPredicted RBP11.98□□□□□ -0.49
CLK3-205ENST00000561673 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
CLK3-205ENST00000561673 ANTXR2P58335 489 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 PSMC6P62333 389 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 FPGSQ05932 587 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 WTAPQ15007 396 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 SLC35G1Q2M3R5 365 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
CLK3-205ENST00000561673 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
CLK3-205ENST00000561673 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms