RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 A0A1W2PQY0 241 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 C6orf222P0C671 652 aaPredicted RBP27.71■■■□□ 2.03
CDR2-202ENST00000561630 NKX3-2P78367 333 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 MCF2L2Q86YR7 1114 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 TMTC2Q8N394 836 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 TBC1D5Q92609 795 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 MAP3K14Q99558 947 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 GDF15Q99988 308 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 PDGFCQ9NRA1 345 aa27.71■■■□□ 2.03
CDR2-202ENST00000561630 GNEQ9Y223 722 aaKnown RBP27.71■■■□□ 2.03
CDR2-202ENST00000561630 MYADML2A6NDP7 307 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 MOXD2PA6NHM9 499 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 SH2B2O14492 632 aaPredicted RBP27.7■■■□□ 2.02
CDR2-202ENST00000561630 EDNRBP24530 442 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 ACLYP53396 1101 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 KCNA10Q16322 511 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 IQSEC1Q6DN90 963 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 NOL8Q76FK4 1167 aaKnown RBP27.7■■■□□ 2.02
CDR2-202ENST00000561630 ZNF654Q8IZM8 581 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 MPHOSPH6Q99547 160 aaKnown RBP27.7■■■□□ 2.02
CDR2-202ENST00000561630 ATP11BQ9Y2G3 1177 aa27.7■■■□□ 2.02
CDR2-202ENST00000561630 PPP1R11O60927 126 aaPredicted RBP27.69■■■□□ 2.02
CDR2-202ENST00000561630 DDAH1O94760 285 aa27.69■■■□□ 2.02
CDR2-202ENST00000561630 SMPD1P17405 629 aa27.69■■■□□ 2.02
CDR2-202ENST00000561630 IRX5P78411 483 aaPredicted RBP27.69■■■□□ 2.02
CDR2-202ENST00000561630 ERICH6BQ5W0A0 696 aa27.69■■■□□ 2.02
CDR2-202ENST00000561630 PCSK9Q8NBP7 692 aaKnown RBP27.69■■■□□ 2.02
CDR2-202ENST00000561630 SYTL5Q8TDW5 730 aaPredicted RBP27.69■■■□□ 2.02
CDR2-202ENST00000561630 NUP133Q8WUM0 1156 aa27.69■■■□□ 2.02
CDR2-202ENST00000561630 MCM3APO60318 1980 aa27.69■■■□□ 2.02
CDR2-202ENST00000561630 CTAGE5O15320 804 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 CYTH3O43739 400 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 LIFRP42702 1097 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 TSGA10IPQ3SY00 556 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 TRIM60Q495X7 471 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 GNASQ5JWF2 1037 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 PIGSQ96S52 555 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 LCTP09848 1927 aa27.68■■■□□ 2.02
CDR2-202ENST00000561630 B4DLN1 442 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 BMP8BP34820 402 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 MAGEA10P43363 369 aaPredicted RBP27.67■■■□□ 2.02
CDR2-202ENST00000561630 MRPL12P52815 198 aaKnown RBP27.67■■■□□ 2.02
CDR2-202ENST00000561630 PDE4DQ08499 809 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 HOMER1Q86YM7 354 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 MYL10Q9BUA6 226 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 PPP4R2Q9NY27 417 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 PCDHA1Q9Y5I3 950 aa27.67■■■□□ 2.02
CDR2-202ENST00000561630 RBM47A0AV96 593 aaKnown RBP27.66■■■□□ 2.02
CDR2-202ENST00000561630 CCDC69A6NI79 296 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 OPLAHO14841 1288 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 KIF5BP33176 963 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 TRAF1Q13077 416 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 NFXL1Q6ZNB6 911 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 TLK2Q86UE8 772 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 RASEFQ8IZ41 740 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 CTCFLQ8NI51 663 aaPredicted RBP27.66■■■□□ 2.02
CDR2-202ENST00000561630 NEK1Q96PY6 1258 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 COL20A1Q9P218 1284 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 Q9Y3F1 56 aa27.66■■■□□ 2.02
CDR2-202ENST00000561630 LRRC37A2A6NM11 1700 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 PNMA6FA0A0J9YX94 578 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 A0A1W2PPC1 479 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 ASGR1P07306 291 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 GHRHRQ02643 423 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 DUSP28Q4G0W2 176 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 TMEM63BQ5T3F8 832 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 NSUN6Q8TEA1 469 aaKnown RBP27.65■■■□□ 2.02
CDR2-202ENST00000561630 TAAR1Q96RJ0 339 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 STARD7Q9NQZ5 370 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 ELP1O95163 1332 aa27.65■■■□□ 2.02
CDR2-202ENST00000561630 DYNC1LI2O43237 492 aaPredicted RBP27.64■■■□□ 2.02
CDR2-202ENST00000561630 CENPBP07199 599 aaPredicted RBP27.64■■■□□ 2.02
CDR2-202ENST00000561630 HSD17B4P51659 736 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 TLE2Q04725 743 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 GLT1D1Q96MS3 346 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 SPZ1Q9BXG8 430 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 LRRC2Q9BYS8 371 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 WDR11Q9BZH6 1224 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 AP5M1Q9H0R1 490 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 MAP3K20Q9NYL2 800 aaKnown RBP27.64■■■□□ 2.02
CDR2-202ENST00000561630 PCDH10Q9P2E7 1040 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 PRKAG2Q9UGJ0 569 aa27.64■■■□□ 2.02
CDR2-202ENST00000561630 LAMA3Q16787 3333 aa27.64■■■□□ 2.01
CDR2-202ENST00000561630 SLC34A2O95436 690 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 CFBP00751 764 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 PTGS1P23219 599 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 SMARCA1P28370 1054 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 FXR1P51114 621 aaKnown RBP eCLIP27.63■■■□□ 2.01
CDR2-202ENST00000561630 BEX3Q00994 111 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 EXOSC10Q01780 885 aaKnown RBP27.63■■■□□ 2.01
CDR2-202ENST00000561630 KRT32Q14532 448 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 FSCN1Q16658 493 aaKnown RBP27.63■■■□□ 2.01
CDR2-202ENST00000561630 SGMS1Q86VZ5 419 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 RMDN3Q96TC7 470 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 LZTS2Q9BRK4 669 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 SLC12A7Q9Y666 1083 aa27.63■■■□□ 2.01
CDR2-202ENST00000561630 CALM1P0DP23 149 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 CALM2P0DP24 149 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 CALM3P0DP25 149 aa27.62■■■□□ 2.01
CDR2-202ENST00000561630 GNAQP50148 359 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms