RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
RPL4-202ENST00000561554 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 KPNA6O60684 536 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 CYP2C9P11712 490 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
RPL4-202ENST00000561554 GRB10Q13322 594 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
RPL4-202ENST00000561554 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 NFRKBQ6P4R8 1299 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
RPL4-202ENST00000561554 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 PDGFCQ9NRA1 345 aa12.92□□□□□ -0.34
RPL4-202ENST00000561554 TET1Q8NFU7 2136 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
RPL4-202ENST00000561554 TMEM232C9JQI7 657 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 BFSP2Q13515 415 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 BRDTQ58F21 947 aaPredicted RBP12.91□□□□□ -0.34
RPL4-202ENST00000561554 KRT40Q6A162 431 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 DEFB128Q7Z7B8 93 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
RPL4-202ENST00000561554 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■■□ 19.6
RPL4-202ENST00000561554 CERS4Q9HA82 394 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 CYP39A1Q9NYL5 469 aa12.91□□□□□ -0.34
RPL4-202ENST00000561554 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
RPL4-202ENST00000561554 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
RPL4-202ENST00000561554 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPL4-202ENST00000561554 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
RPL4-202ENST00000561554 ALADP13716 330 aa12.9□□□□□ -0.34
RPL4-202ENST00000561554 GNAT2P19087 354 aa12.9□□□□□ -0.34
RPL4-202ENST00000561554 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
RPL4-202ENST00000561554 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
RPL4-202ENST00000561554 LCTP09848 1927 aa12.9□□□□□ -0.35
RPL4-202ENST00000561554 RAD50Q92878 1312 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
RPL4-202ENST00000561554 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 CHGBP05060 677 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 ALAS1P13196 640 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 SLC1A4P43007 532 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 KCNJ6P48051 423 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 EEPD1Q7L9B9 569 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 ALYREFQ86V81 257 aaKnown RBP12.89□□□□□ -0.35
RPL4-202ENST00000561554 FAM178BQ8IXR5 827 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 GJD3Q8N144 294 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 CAGE1Q8TC20 777 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
RPL4-202ENST00000561554 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
RPL4-202ENST00000561554 A6NJR5 290 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 MS4A1P11836 297 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 PTGS1P23219 599 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 PDE4BQ07343 736 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
RPL4-202ENST00000561554 RCSD1Q6JBY9 416 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 APPBP2Q92624 585 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPL4-202ENST00000561554 UBE2ZQ9H832 354 aaPredicted RBP12.88□□□□□ -0.35
RPL4-202ENST00000561554 CD320Q9NPF0 282 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
RPL4-202ENST00000561554 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
RPL4-202ENST00000561554 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 EFCAB14O75071 495 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 ICAM1P05362 532 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 MYL3P08590 195 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 TDO2P48775 406 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 ALDH5A1P51649 535 aaPredicted RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 ERVK-21P61565 698 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 RBL2Q08999 1139 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 IKQ13123 557 aaPredicted RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 TMEM63BQ5T3F8 832 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 KBTBD3Q8NAB2 608 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
RPL4-202ENST00000561554 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
RPL4-202ENST00000561554 SIP14410 1827 aa12.86□□□□□ -0.35
RPL4-202ENST00000561554 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
RPL4-202ENST00000561554 GPAA1O43292 621 aa12.86□□□□□ -0.35
RPL4-202ENST00000561554 PRDM1O75626 825 aa12.86□□□□□ -0.35
RPL4-202ENST00000561554 GJB5O95377 273 aa12.86□□□□□ -0.35
RPL4-202ENST00000561554 CXCL10P02778 98 aa12.86□□□□□ -0.35
RPL4-202ENST00000561554 WDR5P61964 334 aaKnown RBP12.86□□□□□ -0.35
RPL4-202ENST00000561554 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms