RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
CCDC113-203ENST00000561517 MRPL11Q9Y3B7 192 aaKnown RBP18.01■□□□□ 0.47
CCDC113-203ENST00000561517 KIAA1217Q5T5P2 1943 aa18.01■□□□□ 0.47
CCDC113-203ENST00000561517 C11orf97A0A1B0GVM6 126 aaPredicted RBP18■□□□□ 0.47
CCDC113-203ENST00000561517 CYTH3O43739 400 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
CCDC113-203ENST00000561517 EDNRBP24530 442 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 RTP1P59025 263 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 TNFAIP2Q03169 654 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 IQSEC1Q6DN90 963 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 MCF2L2Q86YR7 1114 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 TBC1D5Q92609 795 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 FERMT2Q96AC1 680 aa18■□□□□ 0.47
CCDC113-203ENST00000561517 ZMYND8Q9ULU4 1186 aaPredicted RBP18■□□□□ 0.47
CCDC113-203ENST00000561517 GNEQ9Y223 722 aaKnown RBP18■□□□□ 0.47
CCDC113-203ENST00000561517 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 PPP1R11O60927 126 aaPredicted RBP17.99■□□□□ 0.47
CCDC113-203ENST00000561517 GHRHRQ02643 423 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 EEPD1Q7L9B9 569 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 FBXO16Q8IX29 292 aaPredicted RBP17.99■□□□□ 0.47
CCDC113-203ENST00000561517 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 SPC25Q9HBM1 224 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 PDGFCQ9NRA1 345 aa17.99■□□□□ 0.47
CCDC113-203ENST00000561517 A0A1W2PQ45 241 aaPredicted RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 A0A1W2PQY0 241 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 MOXD2PA6NHM9 499 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 OPLAHO14841 1288 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 CTAGE5O15320 804 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 C6orf222P0C671 652 aaPredicted RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 SMPD1P17405 629 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 SYN1P17600 705 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 ACLYP53396 1101 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 IRX5P78411 483 aaPredicted RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 KCNA10Q16322 511 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 SYTL5Q8TDW5 730 aaPredicted RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 KCNB2Q92953 911 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 PIGSQ96S52 555 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 MPHOSPH6Q99547 160 aaKnown RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 GDF15Q99988 308 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 RBM27Q9P2N5 1060 aaKnown RBP17.98■□□□□ 0.47
CCDC113-203ENST00000561517 Q9Y3F1 56 aa17.98■□□□□ 0.47
CCDC113-203ENST00000561517 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 B4DLN1 442 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 KIF5BP33176 963 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 MRPL12P52815 198 aaKnown RBP17.97■□□□□ 0.47
CCDC113-203ENST00000561517 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
CCDC113-203ENST00000561517 TRAF1Q13077 416 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 NFXL1Q6ZNB6 911 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
CCDC113-203ENST00000561517 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
CCDC113-203ENST00000561517 MYL10Q9BUA6 226 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
CCDC113-203ENST00000561517 LTBP2Q14767 1821 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 CALM1P0DP23 149 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 CALM2P0DP24 149 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 CALM3P0DP25 149 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 HSD17B4P51659 736 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 PDE4DQ08499 809 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 KRT32Q14532 448 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 TRIM60Q495X7 471 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 DUSP28Q4G0W2 176 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 GNASQ5JWF2 1037 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
CCDC113-203ENST00000561517 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
CCDC113-203ENST00000561517 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 TAAR1Q96RJ0 339 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 LZTS2Q9BRK4 669 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 MAP3K20Q9NYL2 800 aaKnown RBP17.96■□□□□ 0.47
CCDC113-203ENST00000561517 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
CCDC113-203ENST00000561517 RANBP2P49792 3224 aaKnown RBP17.95■□□□□ 0.46
CCDC113-203ENST00000561517 ASGR1P07306 291 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 BMP8BP34820 402 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 HSPA4P34932 840 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 GNAQP50148 359 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 TMEM63BQ5T3F8 832 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 NSUN6Q8TEA1 469 aaKnown RBP17.95■□□□□ 0.46
CCDC113-203ENST00000561517 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 MYH7BA7E2Y1 1941 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 ELP1O95163 1332 aa17.95■□□□□ 0.46
CCDC113-203ENST00000561517 A0A1W2PPC1 479 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
CCDC113-203ENST00000561517 REC8O95072 547 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 CFBP00751 764 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 PTGS1P23219 599 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 MAGEA10P43363 369 aaPredicted RBP17.94■□□□□ 0.46
CCDC113-203ENST00000561517 IWS1Q96ST2 819 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 RMDN3Q96TC7 470 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms