RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 CALCRLQ16602 461 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 ASPRV1Q53RT3 343 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 GOLGA1Q92805 767 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 BLOC1S4Q9NUP1 217 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 TRIM10Q9UDY6 481 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 CDC23Q9UJX2 597 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 ZHX1Q9UKY1 873 aaPredicted RBP16.36■□□□□ 0.21
CRTC3-210ENST00000560927 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
CRTC3-210ENST00000560927 EPN1Q9Y6I3 576 aaPredicted RBP16.36■□□□□ 0.21
CRTC3-210ENST00000560927 POTEMA6NI47 508 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 PPP1R11O60927 126 aaPredicted RBP16.35■□□□□ 0.21
CRTC3-210ENST00000560927 NDUFA10O95299 355 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 GABPB1Q06547 395 aaPredicted RBP16.35■□□□□ 0.21
CRTC3-210ENST00000560927 SEMA3FQ13275 785 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 DOK7Q18PE1 504 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 KIF4BQ2VIQ3 1234 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 CALML4Q96GE6 196 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
CRTC3-210ENST00000560927 PNMA5Q96PV4 448 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 COA1Q9GZY4 146 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 SLC39A2Q9NP94 309 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 CAPN11Q9UMQ6 739 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 LRRC37AA6NMS7 1700 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 SRGNP10124 158 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 MCM6Q14566 821 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 UBE2SQ16763 222 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 ADGRF4Q8IZF3 695 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 NUDT12Q9BQG2 462 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
CRTC3-210ENST00000560927 MYMKA6NI61 221 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SASH3O75995 380 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 TTLL1O95922 423 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SHMT1P34896 483 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 DNM2P50570 870 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-210ENST00000560927 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
CRTC3-210ENST00000560927 TTYH3Q9C0H2 523 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SEMA6BQ9H3T3 888 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 hCG_1984214I3L0E3 225 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SLC16A2P36021 539 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 TNNI2P48788 182 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 AMPD3Q01432 767 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 ZNF543Q08ER8 600 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 ZNF713Q8N859 430 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-210ENST00000560927 GJA10Q969M2 543 aa16.34■□□□□ 0.21
CRTC3-210ENST00000560927 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
CRTC3-210ENST00000560927 BICDL2A1A5D9 508 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 TRIM37O94972 964 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
CRTC3-210ENST00000560927 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-210ENST00000560927 SV2BQ7L1I2 683 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CRTC3-210ENST00000560927 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 TBC1D8O95759 1140 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 HERVK_113P62684 666 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 ATP2B2Q01814 1243 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 TBC1D8BQ0IIM8 1120 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 NFIAQ12857 509 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 KCNK18Q7Z418 384 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 NAPGQ99747 312 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-210ENST00000560927 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.2
CRTC3-210ENST00000560927 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
CRTC3-210ENST00000560927 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
CRTC3-210ENST00000560927 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
CRTC3-210ENST00000560927 TERF2Q15554 542 aa16.32■□□□□ 0.2
CRTC3-210ENST00000560927 CNNM4Q6P4Q7 775 aa16.32■□□□□ 0.2
CRTC3-210ENST00000560927 KCTD1Q719H9 257 aa16.32■□□□□ 0.2
CRTC3-210ENST00000560927 PROM2Q8N271 834 aa16.32■□□□□ 0.2
CRTC3-210ENST00000560927 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
CRTC3-210ENST00000560927 MPHOSPH10O00566 681 aaKnown RBP16.31■□□□□ 0.2
CRTC3-210ENST00000560927 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 NOC4LQ9BVI4 516 aaKnown RBP16.31■□□□□ 0.2
CRTC3-210ENST00000560927 ANKZF1Q9H8Y5 726 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 RIC8AQ9NPQ8 531 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
CRTC3-210ENST00000560927 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 ECM1Q16610 540 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 MEA1Q16626 185 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
CRTC3-210ENST00000560927 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms