RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 GPR108Q9NPR9 543 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 HOMER2Q9NSB8 354 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 INSL6Q9Y581 213 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 RAD50Q92878 1312 aa11.49□□□□□ -0.57
HERC1-210ENST00000560897 CACNA1GO43497 2377 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 ABHD14A-ACY1A0A1B0GW23 586 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
HERC1-210ENST00000560897 CNTN2Q02246 1040 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 CLUL1Q15846 466 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 NFRKBQ6P4R8 1299 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 EEPD1Q7L9B9 569 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
HERC1-210ENST00000560897 KIFC2Q96AC6 838 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 NUP88Q99567 741 aaPredicted RBP11.48□□□□□ -0.57
HERC1-210ENST00000560897 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
HERC1-210ENST00000560897 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
HERC1-210ENST00000560897 PRR23AA6NEV1 266 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 PROB1E7EW31 1015 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 H0Y858 1186 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 CYP2D6P10635 497 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 PTGS1P23219 599 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 OAZ1P54368 228 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 ZXDAP98168 799 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 EVX2Q03828 476 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 PTPN11Q06124 597 aaPredicted RBP11.47□□□□□ -0.57
HERC1-210ENST00000560897 SMAD4Q13485 552 aaKnown RBP11.47□□□□□ -0.57
HERC1-210ENST00000560897 GPM6BQ13491 265 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 IKBKEQ14164 716 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 CCDC184Q52MB2 194 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 FAM133AQ8N9E0 248 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 SDR42E1Q8WUS8 393 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 FSD1Q9BTV5 496 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 VTA1Q9NP79 307 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
HERC1-210ENST00000560897 TLR9Q9NR96 1032 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 PDGFCQ9NRA1 345 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 SCN10AQ9Y5Y9 1956 aa11.47□□□□□ -0.57
HERC1-210ENST00000560897 PLXNA3P51805 1871 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 TRIOO75962 3097 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 MBTPS2O43462 519 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 SELPP16109 830 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 CDK8P49336 464 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 NUBP1P53384 320 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 VCPP55072 806 aaKnown RBP11.46□□□□□ -0.57
HERC1-210ENST00000560897 CHMP4BP1P59074 171 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 PTGISQ16647 500 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 LRRC8DQ7L1W4 858 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 ASCL5Q7RTU5 278 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 OR6J1Q8NGC5 347 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
HERC1-210ENST00000560897 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
HERC1-210ENST00000560897 MYO15AQ9UKN7 3530 aa11.46□□□□□ -0.58
HERC1-210ENST00000560897 H3BNC9 293 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 KPNA6O60684 536 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 AMHP03971 560 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 AVPR2P30518 371 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 A1CFQ9NQ94 594 aaKnown RBP11.45□□□□□ -0.58
HERC1-210ENST00000560897 RNF146Q9NTX7 359 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 CD207Q9UJ71 328 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
HERC1-210ENST00000560897 MYO7AQ13402 2215 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 F5H6K3 240 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 KRT37O76014 449 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 NDUFB10O96000 172 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 GNAI2P04899 355 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 FDX1P10109 184 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 KLRC3Q07444 240 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 COL19A1Q14993 1142 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
HERC1-210ENST00000560897 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 TAPT1Q6NXT6 567 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 MYOCDQ8IZQ8 938 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
HERC1-210ENST00000560897 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 WDR11Q9BZH6 1224 aa11.44□□□□□ -0.58
HERC1-210ENST00000560897 NOB1Q9ULX3 412 aaKnown RBP11.44□□□□□ -0.58
HERC1-210ENST00000560897 BAZ2AQ9UIF9 1905 aaKnown RBP11.44□□□□□ -0.58
HERC1-210ENST00000560897 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 COL4A6Q14031 1691 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 NLRC5Q86WI3 1866 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 E9PSI1 815 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 CXCL10P02778 98 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
HERC1-210ENST00000560897 TKFCQ3LXA3 575 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 SLC9C2Q5TAH2 1124 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 C16orf86Q6ZW13 317 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 DGLUCYQ7Z3D6 616 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 PPP1R13LQ8WUF5 828 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
HERC1-210ENST00000560897 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms