RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 SYTL5Q8TDW5 730 aaPredicted RBP17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 ABHD16BQ9H3Z7 469 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 PCDHA1Q9Y5I3 950 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 FRMPD3Q5JV73 1810 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 ADCY6O43306 1168 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 COL6A1P12109 1028 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 CALML3P27482 149 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 RCAN1P53805 252 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 APOBRQ0VD83 1088 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 IL17RAQ96F46 866 aa17.71■□□□□ 0.43
SNRPA1-213ENST00000560856 ZBTB43O43298 467 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 EDNRBP24530 442 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 CDC27P30260 824 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 HSD17B4P51659 736 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 EVCP57679 992 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 MCF2L2Q86YR7 1114 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 PIBF1Q8WXW3 757 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 BRF1Q92994 677 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 TAAR1Q96RJ0 339 aa17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 ADD3Q9UEY8 706 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-213ENST00000560856 AKR1A1P14550 325 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 TOB2Q14106 344 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 RTN1Q16799 776 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 CCDC144BQ3MJ40 725 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 TAPT1Q6NXT6 567 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 NECAB2Q7Z6G3 386 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
SNRPA1-213ENST00000560856 NID2Q14112 1375 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 ANAPC15P60006 121 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 CCDC82Q8N4S0 544 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 SAMD3Q8N6K7 520 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 RBM28Q9NW13 759 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 CYP46A1Q9Y6A2 500 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 CNTNAP5Q8WYK1 1306 aa17.68■□□□□ 0.42
SNRPA1-213ENST00000560856 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 GOLGA8BA8MQT2 603 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 ADAMTS4O75173 837 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 CFBP00751 764 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 RARBP10826 455 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 FGD1P98174 961 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 TRAF1Q13077 416 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 LRRC41Q15345 812 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 TMEM63BQ5T3F8 832 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 FBXO16Q8IX29 292 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 ARRDC4Q8NCT1 418 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 C11orf49Q9H6J7 331 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 VTA1Q9NP79 307 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
SNRPA1-213ENST00000560856 RBM47A0AV96 593 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 DNM1LO00429 736 aa17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 PGK1P00558 417 aa17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 IRX5P78411 483 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 XPNPEP3Q9NQH7 507 aa17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 GNEQ9Y223 722 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-213ENST00000560856 CEP290O15078 2479 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 CTAGE5O15320 804 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 PTGS1P23219 599 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 PDIA3P30101 505 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 HOXA13P31271 388 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 ADCYAP1R1P41586 468 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 NKX3-2P78367 333 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 IQSEC1Q6DN90 963 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 CCSAPQ6IQ19 270 aaPredicted RBP17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 UPF3AQ9H1J1 476 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
SNRPA1-213ENST00000560856 MYADML2A6NDP7 307 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 GCOM1H8Y6P7 765 aaPredicted RBP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 POLR2MP0CAP2 368 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 SMPD1P17405 629 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 GJA9P57773 515 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms