RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 DEFB128Q7Z7B8 93 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 FAM133AQ8N9E0 248 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 NAPBQ9H115 298 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 EPB41L4AQ9HCS5 686 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 PDGFCQ9NRA1 345 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 IGKV6D-41A0A0C4DH26 115 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 TSPY2A6NKD2 308 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 CTAGE5O15320 804 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 MYL3P08590 195 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 ATP2A2P16615 1042 aaKnown RBP12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 SMPD1P17405 629 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 MKL1Q969V6 931 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 NECAB3Q96P71 396 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 NOC4LQ9BVI4 516 aaKnown RBP12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 KATNBL1Q9H079 304 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 LCTP09848 1927 aa12.44□□□□□ -0.42
CDC42BPB-207ENST00000560492 CYP2C9P11712 490 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 ACTN1P12814 892 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 TFF2Q03403 129 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 IQSEC1Q6DN90 963 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 GNEQ9Y223 722 aaKnown RBP12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
CDC42BPB-207ENST00000560492 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 PATL2C9JE40 543 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 RFXAPO00287 272 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 PPARAQ07869 468 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 FSD1Q9BTV5 496 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 CYP39A1Q9NYL5 469 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 ADD3Q9UEY8 706 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 REV3LO60673 3130 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 TANC1Q9C0D5 1861 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
CDC42BPB-207ENST00000560492 ZNF536O15090 1300 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 GRIN2DO15399 1336 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 TNKSO95271 1327 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 CA3P07451 260 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 CPT1AP50416 773 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 KCNQ1P51787 676 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 BRDTQ58F21 947 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 TMEM63BQ5T3F8 832 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 OR6J1Q8NGC5 347 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 SEC62Q99442 399 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
CDC42BPB-207ENST00000560492 RAD50Q92878 1312 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 TRIP12Q14669 1992 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 KIF28PB7ZC32 967 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 PFKMP08237 780 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 PYGBP11216 843 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 CALML3P27482 149 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 PLA2G5P39877 138 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 NKX3-2P78367 333 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 Q9Y3F1 56 aa12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 COL4A4P53420 1690 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-207ENST00000560492 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-207ENST00000560492 NCOR1O75376 2440 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms