RNA–Protein interactions for RNA: ENST00000559522.1

PIF1-206, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-206ENST00000559522 NKX3-2P78367 333 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 HDAC1Q13547 482 aaPredicted RBP16.65■□□□□ 0.26
PIF1-206ENST00000559522 USH1GQ495M9 461 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 PPP1R13LQ8WUF5 828 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
PIF1-206ENST00000559522 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 PRDM12Q9H4Q4 367 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 GRIN2DO15399 1336 aa16.65■□□□□ 0.26
PIF1-206ENST00000559522 ZNF213O14771 459 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 PDHBP11177 359 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 CYP2C9P11712 490 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 NOVP48745 357 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 CCDC85BQ15834 202 aaPredicted RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 DUSP28Q4G0W2 176 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 HERVK_113Q902F9 699 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 SCLYQ96I15 445 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 TTC14Q96N46 770 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 MPHOSPH6Q99547 160 aaKnown RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
PIF1-206ENST00000559522 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
PIF1-206ENST00000559522 SDSP20132 328 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 RABGGTBP53611 331 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
PIF1-206ENST00000559522 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 ESR2Q92731 530 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 NOC4LQ9BVI4 516 aaKnown RBP16.63■□□□□ 0.25
PIF1-206ENST00000559522 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
PIF1-206ENST00000559522 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
PIF1-206ENST00000559522 POLR3EQ9NVU0 708 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 DNAH12Q6ZR08 3092 aa16.63■□□□□ 0.25
PIF1-206ENST00000559522 B4DLN1 442 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 DHX16O60231 1041 aaKnown RBP16.62■□□□□ 0.25
PIF1-206ENST00000559522 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 CPT1AP50416 773 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
PIF1-206ENST00000559522 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
PIF1-206ENST00000559522 RAB30Q15771 203 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
PIF1-206ENST00000559522 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 COPS5Q92905 334 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 SEZ6LQ9BYH1 1024 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
PIF1-206ENST00000559522 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 PRDM6Q9NQX0 595 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
PIF1-206ENST00000559522 COL6A3P12111 3177 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 TXNP10599 105 aaKnown RBP16.61■□□□□ 0.25
PIF1-206ENST00000559522 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 RASIP1Q5U651 963 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
PIF1-206ENST00000559522 MTG1Q9BT17 334 aaPredicted RBP16.61■□□□□ 0.25
PIF1-206ENST00000559522 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
PIF1-206ENST00000559522 KDM4AO75164 1064 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 PURAQ00577 322 aaKnown RBP16.6■□□□□ 0.25
PIF1-206ENST00000559522 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
PIF1-206ENST00000559522 WNT8AQ9H1J5 351 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 TNKSO95271 1327 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 RAD50Q92878 1312 aa16.6■□□□□ 0.25
PIF1-206ENST00000559522 MCM3APO60318 1980 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 IGHDP01880 384 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
PIF1-206ENST00000559522 MYOGP15173 224 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
PIF1-206ENST00000559522 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 YBX2Q9Y2T7 364 aaKnown RBP16.59■□□□□ 0.25
PIF1-206ENST00000559522 NEDD4P46934 1319 aa16.59■□□□□ 0.25
PIF1-206ENST00000559522 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.24
PIF1-206ENST00000559522 B4E1Z4 1266 aa16.58■□□□□ 0.24
PIF1-206ENST00000559522 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
PIF1-206ENST00000559522 TTLL4Q14679 1199 aa16.58■□□□□ 0.24
PIF1-206ENST00000559522 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
PIF1-206ENST00000559522 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms