RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-211ENST00000559460 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
SMAD3-211ENST00000559460 PRR23AA6NEV1 266 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 PROB1E7EW31 1015 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 MBTPS2O43462 519 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 KPNA6O60684 536 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 AMHP03971 560 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 PTGS1P23219 599 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 CDK8P49336 464 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 ZXDAP98168 799 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 EVX2Q03828 476 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
SMAD3-211ENST00000559460 TTF1Q15361 905 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-211ENST00000559460 PTGISQ16647 500 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 EPC2Q52LR7 807 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 ASCL5Q7RTU5 278 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 FAM133AQ8N9E0 248 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 SLC38A10Q9HBR0 1119 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 MYH8P13535 1937 aa11.62□□□□□ -0.55
SMAD3-211ENST00000559460 MCM3APO60318 1980 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 E9PSI1 815 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 GNAI2P04899 355 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 FDX1P10109 184 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 SELPP16109 830 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 AVPR2P30518 371 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 NUBP1P53384 320 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 SIGLEC14Q08ET2 396 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 IKQ13123 557 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-211ENST00000559460 MCTP2Q6DN12 878 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 YME1L1Q96TA2 773 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
SMAD3-211ENST00000559460 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
SMAD3-211ENST00000559460 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
SMAD3-211ENST00000559460 F5H6K3 240 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 H3BNC9 293 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 VCPP55072 806 aaKnown RBP11.6□□□□□ -0.55
SMAD3-211ENST00000559460 KLRC3Q07444 240 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-211ENST00000559460 SLC9C2Q5TAH2 1124 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 TAPT1Q6NXT6 567 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
SMAD3-211ENST00000559460 CD207Q9UJ71 328 aa11.6□□□□□ -0.55
SMAD3-211ENST00000559460 NDUFB10O96000 172 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 NDUFV1P49821 464 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 TKFCQ3LXA3 575 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 ZBTB33Q86T24 672 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 FBXO11Q86XK2 927 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 PPP1R13LQ8WUF5 828 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-211ENST00000559460 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 MPHOSPH6Q99547 160 aaKnown RBP11.59□□□□□ -0.55
SMAD3-211ENST00000559460 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-211ENST00000559460 ANTXR1Q9H6X2 564 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 ATP8A2Q9NTI2 1148 aa11.59□□□□□ -0.55
SMAD3-211ENST00000559460 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
SMAD3-211ENST00000559460 PNMA6EA0A0J9YXQ4 647 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■□□□□ 9.7
SMAD3-211ENST00000559460 KRT37O76014 449 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 CXCL10P02778 98 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 ALAS1P13196 640 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 PDE6AP16499 860 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 PPP2R5BQ15173 497 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 DGLUCYQ7Z3D6 616 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 ADSSL1Q8N142 457 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 IGFLR1Q9H665 355 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 ADD3Q9UEY8 706 aaKnown RBP11.58□□□□□ -0.56
SMAD3-211ENST00000559460 ZNF532Q9HCE3 1301 aa11.58□□□□□ -0.56
SMAD3-211ENST00000559460 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-211ENST00000559460 SURF6O75683 361 aaKnown RBP11.57□□□□□ -0.56
SMAD3-211ENST00000559460 NBL1P41271 181 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 STAT2P52630 851 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 TMEM63BQ5T3F8 832 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 C12orf60Q5U649 245 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 NSMFQ6X4W1 530 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 MKNK2Q9HBH9 465 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
SMAD3-211ENST00000559460 NYAP2Q9P242 653 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 USP34Q70CQ2 3546 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 KMT2EQ8IZD2 1858 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 TECTAO75443 2155 aa11.57□□□□□ -0.56
SMAD3-211ENST00000559460 CFAP54Q96N23 3096 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 COL4A6Q14031 1691 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 CYP2D7A0A087X1C5 515 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 NBNO60934 754 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms