RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 MCM5P33992 734 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.32
BMP4-204ENST00000558961 ACLYP53396 1101 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
BMP4-204ENST00000558961 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
BMP4-204ENST00000558961 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 CHST3Q7LGC8 479 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
BMP4-204ENST00000558961 Q9Y3F1 56 aa13.08□□□□□ -0.32
BMP4-204ENST00000558961 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.32
BMP4-204ENST00000558961 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 SH2B2O14492 632 aaPredicted RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 ZBTB5O15062 677 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 PRC1O43663 620 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 CYTH3O43739 400 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 SYN1P17600 705 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 CALML3P27482 149 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 LIFRP42702 1097 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 TSGA10IPQ3SY00 556 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 PCSK9Q8NBP7 692 aaKnown RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 AMNQ9BXJ7 453 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 RBM19Q9Y4C8 960 aaKnown RBP13.07□□□□□ -0.32
BMP4-204ENST00000558961 ELP1O95163 1332 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
BMP4-204ENST00000558961 BAZ2BQ9UIF8 2168 aaKnown RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 DHX16O60231 1041 aaKnown RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 SMPD1P17405 629 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 HSD17B4P51659 736 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 KCNA10Q16322 511 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 TRIM60Q495X7 471 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 RNF20Q5VTR2 975 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 ANKRD33Q7Z3H0 272 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 TLK2Q86UE8 772 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 ZNF654Q8IZM8 581 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 SAMD3Q8N6K7 520 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 SPZ1Q9BXG8 430 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 PDLIM7Q9NR12 457 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 PDGFCQ9NRA1 345 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
BMP4-204ENST00000558961 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
BMP4-204ENST00000558961 ASGR1P07306 291 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 TRAF1Q13077 416 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 DUSP28Q4G0W2 176 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 SGMS1Q86VZ5 419 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 TBC1D5Q92609 795 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
BMP4-204ENST00000558961 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
BMP4-204ENST00000558961 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 B4DLN1 442 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 KIF5BP33176 963 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 CDK7P50613 346 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
BMP4-204ENST00000558961 PDE4DQ08499 809 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 TMEM63BQ5T3F8 832 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 KCNB2Q92953 911 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 PIGSQ96S52 555 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 IWS1Q96ST2 819 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
BMP4-204ENST00000558961 NKRFO15226 690 aaKnown RBP eCLIP13.03□□□□□ -0.32
BMP4-204ENST00000558961 SEC24BO95487 1268 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 CALM1P0DP23 149 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 CALM2P0DP24 149 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 CALM3P0DP25 149 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 TLE2Q04725 743 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 FSCN1Q16658 493 aaKnown RBP13.03□□□□□ -0.32
BMP4-204ENST00000558961 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 SLC43A3Q8NBI5 491 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
BMP4-204ENST00000558961 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
BMP4-204ENST00000558961 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 NEK1Q96PY6 1258 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
BMP4-204ENST00000558961 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms