RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 SMG6Q86US8 1419 aaKnown RBP8.06□□□□□ -1.12
LRRC28-209ENST00000558861 FAM170BA6NMN3 283 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 C9IYK1 514 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 PMS1P54277 932 aaKnown RBP8.06□□□□□ -1.12
LRRC28-209ENST00000558861 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
LRRC28-209ENST00000558861 VHLLQ6RSH7 139 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 FAM178BQ8IXR5 827 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 KREMEN1Q96MU8 473 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.06□□□□□ -1.12
LRRC28-209ENST00000558861 TPX2Q9ULW0 747 aaKnown RBP8.06□□□□□ -1.12
LRRC28-209ENST00000558861 KNSTRNQ9Y448 316 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 ABCC6O95255 1503 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
LRRC28-209ENST00000558861 TP53P04637 393 aaPredicted RBP8.05□□□□□ -1.12
LRRC28-209ENST00000558861 ETV3P41162 512 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 DDX10Q13206 875 aaKnown RBP8.05□□□□□ -1.12
LRRC28-209ENST00000558861 RASA3Q14644 834 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 GNPTABQ3T906 1256 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 RNF43Q68DV7 783 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 ZNF765Q7L2R6 523 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 KCNH5Q8NCM2 988 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 COG3Q96JB2 828 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 DHRS1Q96LJ7 313 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 SNTG2Q9NY99 539 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 MSRB2Q9Y3D2 182 aa8.05□□□□□ -1.12
LRRC28-209ENST00000558861 AFF2P51816 1311 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 ATRNO75882 1429 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 PEAK1Q9H792 1746 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 F13BP05160 661 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 CHMP4BP1P59074 171 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 SLC7A5Q01650 507 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 NFIAQ12857 509 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 RRS1Q15050 365 aaKnown RBP8.04□□□□□ -1.12
LRRC28-209ENST00000558861 GPAT2Q6NUI2 795 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 OGFOD3Q6PK18 319 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 GIMAP7Q8NHV1 300 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 DEPDC7Q96QD5 511 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
LRRC28-209ENST00000558861 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
LRRC28-209ENST00000558861 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-209ENST00000558861 COL14A1Q05707 1796 aaKnown RBP8.04□□□□□ -1.12
LRRC28-209ENST00000558861 RTL1A6NKG5 1358 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 INSRP06213 1382 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 RSPO4Q2I0M5 234 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 AXDND1Q5T1B0 1012 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 NBPF12Q5TAG4 269 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 FAM214BQ7L5A3 538 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 IP6K1Q92551 441 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 HEXIM2Q96MH2 286 aaKnown RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 MKRN2Q9H000 416 aaKnown RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.03□□□□□ -1.12
LRRC28-209ENST00000558861 NWD2Q9ULI1 1742 aa8.03□□□□□ -1.12
LRRC28-209ENST00000558861 PLCH1Q4KWH8 1693 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 MSTNO14793 375 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 H2AFB1P0C5Y9 115 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 H2AFB2P0C5Z0 115 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 FSTP19883 344 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 HOXC9P31274 260 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 NCAPHQ15003 741 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 BBS9Q3SYG4 887 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 DCAF15Q66K64 600 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-209ENST00000558861 UNC5CLQ8IV45 518 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 MKL1Q969V6 931 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 BTG4Q9NY30 223 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 U3KQE9 123 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 BLMP54132 1417 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-209ENST00000558861 NCAPD2Q15021 1401 aa8.02□□□□□ -1.13
LRRC28-209ENST00000558861 COL3A1P02461 1466 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-209ENST00000558861 FLT4P35916 1363 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 PRR33A8MZF0 331 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 WDR64B1ANS9 1081 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 LRRN2O75325 713 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 RNF4P78317 190 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 VPS72Q15906 364 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
LRRC28-209ENST00000558861 GIMAP6Q6P9H5 292 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 CCDC144CPQ8IYA2 1237 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 SHKBP1Q8TBC3 707 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 HAUS7Q99871 368 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 GLI3P10071 1580 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms