RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 KCNA10Q16322 511 aa17.79■□□□□ 0.44
RPL28-207ENST00000558815 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
RPL28-207ENST00000558815 PIGSQ96S52 555 aa17.79■□□□□ 0.44
RPL28-207ENST00000558815 MPHOSPH6Q99547 160 aaKnown RBP17.79■□□□□ 0.44
RPL28-207ENST00000558815 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
RPL28-207ENST00000558815 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
RPL28-207ENST00000558815 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
RPL28-207ENST00000558815 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
RPL28-207ENST00000558815 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
RPL28-207ENST00000558815 CFBP00751 764 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 SMPD1P17405 629 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 RXRAP19793 462 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 MAGEA10P43363 369 aaPredicted RBP17.78■□□□□ 0.44
RPL28-207ENST00000558815 GJA9P57773 515 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
RPL28-207ENST00000558815 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 GNASQ5JWF2 1037 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 TAPT1Q6NXT6 567 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 MCF2L2Q86YR7 1114 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 KLHDC9Q8NEP7 349 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 CTCFLQ8NI51 663 aaPredicted RBP17.78■□□□□ 0.44
RPL28-207ENST00000558815 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 STARD7Q9NQZ5 370 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 PRKAG2Q9UGJ0 569 aa17.78■□□□□ 0.44
RPL28-207ENST00000558815 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
RPL28-207ENST00000558815 ZBTB5O15062 677 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 DYNC1LI2O43237 492 aaPredicted RBP17.77■□□□□ 0.44
RPL28-207ENST00000558815 PPP1R11O60927 126 aaPredicted RBP17.77■□□□□ 0.44
RPL28-207ENST00000558815 MORC4Q8TE76 937 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 NEK1Q96PY6 1258 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 TSEN34Q9BSV6 310 aaKnown RBP17.77■□□□□ 0.44
RPL28-207ENST00000558815 UPF3AQ9H1J1 476 aaKnown RBP17.77■□□□□ 0.44
RPL28-207ENST00000558815 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
RPL28-207ENST00000558815 MOXD2PA6NHM9 499 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 CYTH3O43739 400 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 PQBP1O60828 265 aaKnown RBP17.76■□□□□ 0.43
RPL28-207ENST00000558815 DDAH1O94760 285 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 ASGR1P07306 291 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 TLE2Q04725 743 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
RPL28-207ENST00000558815 RGS22Q8NE09 1264 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 DNERQ8NFT8 737 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 SYTL5Q8TDW5 730 aaPredicted RBP17.76■□□□□ 0.43
RPL28-207ENST00000558815 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 TCEANC2Q96MN5 208 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 GLT1D1Q96MS3 346 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 LBHD1Q9BQE6 289 aaPredicted RBP17.76■□□□□ 0.43
RPL28-207ENST00000558815 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
RPL28-207ENST00000558815 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 B4DLN1 442 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 KIF5BP33176 963 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 MRPL12P52815 198 aaKnown RBP17.75■□□□□ 0.43
RPL28-207ENST00000558815 SNX17Q15036 470 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
RPL28-207ENST00000558815 CCSAPQ6IQ19 270 aaPredicted RBP17.75■□□□□ 0.43
RPL28-207ENST00000558815 GDF15Q99988 308 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 WDR11Q9BZH6 1224 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 UBE2OQ9C0C9 1292 aaKnown RBP17.75■□□□□ 0.43
RPL28-207ENST00000558815 PRO3102Q9H379 93 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 GNEQ9Y223 722 aaKnown RBP17.75■□□□□ 0.43
RPL28-207ENST00000558815 LTBP2Q14767 1821 aa17.75■□□□□ 0.43
RPL28-207ENST00000558815 PLEKHA8P1O95397 391 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
RPL28-207ENST00000558815 CST5P28325 142 aaPredicted RBP17.74■□□□□ 0.43
RPL28-207ENST00000558815 LIFRP42702 1097 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
RPL28-207ENST00000558815 ADCK5Q3MIX3 580 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 ARHGEF16Q5VV41 709 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
RPL28-207ENST00000558815 TMTC2Q8N394 836 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 RMDN3Q96TC7 470 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 SLC12A7Q9Y666 1083 aa17.74■□□□□ 0.43
RPL28-207ENST00000558815 PNMA6FA0A0J9YX94 578 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 OPLAHO14841 1288 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 CTAGE5O15320 804 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 EDNRBP24530 442 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
RPL28-207ENST00000558815 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
RPL28-207ENST00000558815 PPP2R5BQ15173 497 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 DUSP28Q4G0W2 176 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 CXCL17Q6UXB2 119 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 SH3RF1Q7Z6J0 888 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 NSUN6Q8TEA1 469 aaKnown RBP17.73■□□□□ 0.43
RPL28-207ENST00000558815 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
RPL28-207ENST00000558815 CALM1P0DP23 149 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 CALM2P0DP24 149 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 CALM3P0DP25 149 aa17.72■□□□□ 0.43
RPL28-207ENST00000558815 TRAF1Q13077 416 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms