RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	ASPH	Q12797	758 aa		10.52	□□□□□ -0.72
TRPM1-208	ENST00000558768	OTUD7B	Q6GQQ9	843 aa		10.52	□□□□□ -0.72
TRPM1-208	ENST00000558768	TRIML1	Q8N9V2	468 aa		10.52	□□□□□ -0.72
TRPM1-208	ENST00000558768	EHMT1	Q9H9B1	1298 aa		10.52	□□□□□ -0.72
TRPM1-208	ENST00000558768	FANCA	O15360	1455 aa		10.52	□□□□□ -0.72
TRPM1-208	ENST00000558768	TAF5L	O75529	589 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KRT7	P08729	469 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KLHL30	Q0D2K2	578 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	MMEL1	Q495T6	779 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KRT79	Q5XKE5	535 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KSR2	Q6VAB6	950 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	NANOGNB	Q7Z5D8	188 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	LINS1	Q8NG48	757 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	SNRNP27	Q8WVK2	155 aa	Known RBP	10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	TEKT4	Q8WW24	435 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZKSCAN3	Q9BRR0	538 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	ANGPTL3	Q9Y5C1	460 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	LRRC7	Q96NW7	1537 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	SPHKAP	Q2M3C7	1700 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768		E7ENQ6	273 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	ADCY3	O60266	1144 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	CAND2	O75155	1236 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	TSPAN9	O75954	239 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	SASH3	O75995	380 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KRT14	P02533	472 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	REXO1L1P	Q8IX06	675 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	PALM2	Q8IXS6	379 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	PRPF38A	Q8NAV1	312 aa	Known RBP	10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	CYTH2	Q99418	400 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	EHD2	Q9NZN4	543 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	NDUFA13	Q9P0J0	144 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	KIAA1210	Q9ULL0	1709 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZNF148	Q9UQR1	794 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	ADGRL3	Q9HAR2	1447 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	SALL3	Q9BXA9	1300 aa		10.52	□□□□□ -0.73
TRPM1-208	ENST00000558768	VWA3A	A6NCI4	1184 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	HNRNPCL2	B2RXH8	293 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	TRAF5	O00463	557 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GYG2	O15488	501 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	HNRNPCL1	O60812	293 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RPS6KA5	O75582	802 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	POSTN	Q15063	836 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RTN1	Q16799	776 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GLE1	Q53GS7	698 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	SWT1	Q5T5J6	900 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	BEND3	Q5T5X7	828 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RFWD2	Q8NHY2	731 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	USP33	Q8TEY7	942 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	KIF9	Q9HAQ2	790 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	AGTPBP1	Q9UPW5	1226 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	CLIC4	Q9Y696	253 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	NBPF26	B4DH59	902 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	KCNK3	O14649	394 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	PYGB	P11216	843 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	SERPINB10	P48595	397 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	OLFML2B	Q68BL8	750 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ARHGEF25	Q86VW2	580 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	NBPF15	Q8N660	670 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RNF169	Q8NCN4	708 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	LRRN4CL	Q8ND94	238 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	FLCN	Q8NFG4	579 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GRK7	Q8WTQ7	553 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	OMA1	Q96E52	524 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	UPF3A	Q9H1J1	476 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ANKFY1	Q9P2R3	1169 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	AFG3L2	Q9Y4W6	797 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	PCDHA5	Q9Y5H7	936 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GMNC	A6NCL1	334 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768		H3BQF6	201 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GPC4	O75487	556 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ST13	P50502	369 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	WTAP	Q15007	396 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	FBXW10	Q5XX13	1052 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	JADE1	Q6IE81	842 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	LRRC31	Q6UY01	552 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	MFSD6	Q6ZSS7	791 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RSRC2	Q7L4I2	434 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ELAC2	Q9BQ52	826 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	DPH5	Q9H2P9	285 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	RASGRF2	O14827	1237 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	DIAPH2	O60879	1101 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	HEXIM1	O94992	359 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	EEF1G	P26641	437 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	GNAQ	P50148	359 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	AP1B1	Q10567	949 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	BIRC3	Q13489	604 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	SLC39A14	Q15043	492 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	NUGGC	Q68CJ6	796 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	CHST3	Q7LGC8	479 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	ARHGAP22	Q7Z5H3	698 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	KCNV2	Q8TDN2	545 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	NOVA2	Q9UNW9	492 aa	Known RBP	10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	CTNND2	Q9UQB3	1225 aa		10.51	□□□□□ -0.73
TRPM1-208	ENST00000558768	SNX5	Q9Y5X3	404 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms