RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
PSMA4-207ENST00000558635 MROH8Q9H579 483 aa12.04□□□□□ -0.48
PSMA4-207ENST00000558635 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
PSMA4-207ENST00000558635 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
PSMA4-207ENST00000558635 PNMA6FA0A0J9YX94 578 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-207ENST00000558635 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
PSMA4-207ENST00000558635 SCRN1Q12765 414 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 TKFCQ3LXA3 575 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 USH1GQ495M9 461 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
PSMA4-207ENST00000558635 SLC15A5A6NIM6 579 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 CPLX1O14810 134 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
PSMA4-207ENST00000558635 GNRH1P01148 92 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 FCER1AP12319 257 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 IFNAR1P17181 557 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 PTPREP23469 700 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 HOXD10P28358 340 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 NTRK3Q16288 839 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 MORN1Q5T089 497 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 CTU1Q7Z7A3 348 aaKnown RBP12.02□□□□□ -0.49
PSMA4-207ENST00000558635 CHST13Q8NET6 341 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 PHKBQ93100 1093 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 MMP19Q99542 508 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 ACAD9Q9H845 621 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
PSMA4-207ENST00000558635 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 FBXO40Q9UH90 709 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 PNMA2Q9UL42 364 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 GABRQQ9UN88 632 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 IVNS1ABPQ9Y6Y0 642 aa12.02□□□□□ -0.49
PSMA4-207ENST00000558635 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
PSMA4-207ENST00000558635 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
PSMA4-207ENST00000558635 CASP8AP2Q9UKL3 1982 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 STRNO43815 780 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 PRKCZQ05513 592 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 CLEC4DQ8WXI8 215 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
PSMA4-207ENST00000558635 NUDT12Q9BQG2 462 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 ABCB11O95342 1321 aa12.01□□□□□ -0.49
PSMA4-207ENST00000558635 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
PSMA4-207ENST00000558635 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 NFIBO00712 420 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 ARHGAP33O14559 1287 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 PRPF3O43395 683 aaKnown RBP12□□□□□ -0.49
PSMA4-207ENST00000558635 DTNBO60941 627 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 ADORA2AP29274 412 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 FLT3LGP49771 235 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
PSMA4-207ENST00000558635 TRAF1Q13077 416 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 GRB14Q14449 540 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 KCTD2Q14681 263 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
PSMA4-207ENST00000558635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
PSMA4-207ENST00000558635 ANKRD35Q8N283 1001 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 USP6NLQ92738 828 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 SLC26A6Q9BXS9 759 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 PTPN22Q9Y2R2 807 aa12□□□□□ -0.49
PSMA4-207ENST00000558635 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
PSMA4-207ENST00000558635 COBLO75128 1261 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 CDKL5O76039 1030 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 CTDNEP1O95476 244 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 PGK2P07205 417 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 CYP2B6P20813 491 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 MCM2P49736 904 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 PRMT2P55345 433 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
PSMA4-207ENST00000558635 ST3GAL1Q11201 340 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 PKN1Q16512 942 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 NSMFQ6X4W1 530 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 HEATR3Q7Z4Q2 680 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 DPP9Q86TI2 863 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 CCDC83Q8IWF9 413 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 SOCS4Q8WXH5 440 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 TBC1D5Q92609 795 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.493e-6■□□□□ 9.4
PSMA4-207ENST00000558635 DDX11Q96FC9 970 aa11.99□□□□□ -0.49
PSMA4-207ENST00000558635 RNF26Q9BY78 433 aaPredicted RBP11.99□□□□□ -0.49
PSMA4-207ENST00000558635 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
PSMA4-207ENST00000558635 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
PSMA4-207ENST00000558635 OPLAHO14841 1288 aa11.98□□□□□ -0.49
PSMA4-207ENST00000558635 RGS2P41220 211 aa11.98□□□□□ -0.49
PSMA4-207ENST00000558635 BAATQ14032 418 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms