RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ZNF274Q96GC6 653 aaPredicted RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 PAK6Q9NQU5 681 aaPredicted RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.09
LRRC28-206ENST00000558471 NID2Q14112 1375 aa14.46□□□□□ -0.1
LRRC28-206ENST00000558471 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 SNAI1O95863 264 aaPredicted RBP14.45□□□□□ -0.1
LRRC28-206ENST00000558471 GJB1P08034 283 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 CYBAP13498 195 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 MSL3Q8N5Y2 521 aaKnown RBP14.45□□□□□ -0.1
LRRC28-206ENST00000558471 BACH2Q9BYV9 841 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 MAF1Q9H063 256 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.45□□□□□ -0.1
LRRC28-206ENST00000558471 NCOA5Q9HCD5 579 aaKnown RBP14.45□□□□□ -0.1
LRRC28-206ENST00000558471 TPCN1Q9ULQ1 816 aa14.45□□□□□ -0.1
LRRC28-206ENST00000558471 CFBP00751 764 aa14.44□□□□□ -0.1
LRRC28-206ENST00000558471 EN2P19622 333 aaPredicted RBP14.44□□□□□ -0.1
LRRC28-206ENST00000558471 STK3Q13188 491 aa14.44□□□□□ -0.1
LRRC28-206ENST00000558471 NTRK3Q16288 839 aa14.44□□□□□ -0.1
LRRC28-206ENST00000558471 SYTL5Q8TDW5 730 aaPredicted RBP14.44□□□□□ -0.1
LRRC28-206ENST00000558471 DEFB118Q96PH6 123 aa14.44□□□□□ -0.1
LRRC28-206ENST00000558471 UPF2Q9HAU5 1272 aaKnown RBP14.44□□□□□ -0.1
LRRC28-206ENST00000558471 COL20A1Q9P218 1284 aa14.44□□□□□ -0.1
LRRC28-206ENST00000558471 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
LRRC28-206ENST00000558471 SYNGAP1Q96PV0 1343 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 ASB14A6NK59 587 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 PPFIA3O75145 1194 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 SGPL1O95470 568 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 CNGA1P29973 690 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 GJA8P48165 433 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 HSD17B4P51659 736 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 GHRHRQ02643 423 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 ANKRD1Q15327 319 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 IFFO2Q5TF58 517 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 ARMCX2Q7L311 632 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
LRRC28-206ENST00000558471 TAAR1Q96RJ0 339 aa14.43□□□□□ -0.1
LRRC28-206ENST00000558471 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-206ENST00000558471 ADD3Q9UEY8 706 aaKnown RBP14.43□□□□□ -0.1
LRRC28-206ENST00000558471 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 HOXA13P31271 388 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 ALDH5A1P51649 535 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 LHX8Q68G74 356 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 NOL8Q76FK4 1167 aaKnown RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 HEATR3Q7Z4Q2 680 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 PHKBQ93100 1093 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 MAP3K20Q9NYL2 800 aaKnown RBP14.42□□□□□ -0.1
LRRC28-206ENST00000558471 NRBP1Q9UHY1 535 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 CNPY2Q9Y2B0 182 aa14.42□□□□□ -0.1
LRRC28-206ENST00000558471 FRMPD3Q5JV73 1810 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 GCOM1H8Y6P7 765 aaPredicted RBP14.41□□□□□ -0.1
LRRC28-206ENST00000558471 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
LRRC28-206ENST00000558471 PFKFB2O60825 505 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 TFRCP02786 760 aaKnown RBP14.41□□□□□ -0.1
LRRC28-206ENST00000558471 POLR2MP0CAP2 368 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 IFNAR1P17181 557 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 SCRN1Q12765 414 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 ACVR2BQ13705 512 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 PKN1Q16512 942 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 ME3Q16798 604 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 WWC2Q6AWC2 1192 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 SHISA4Q96DD7 197 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 TBC1D32Q96NH3 1257 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 KATNBL1Q9H079 304 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 ABHD16BQ9H3Z7 469 aa14.41□□□□□ -0.1
LRRC28-206ENST00000558471 DDX20Q9UHI6 824 aaKnown RBP14.41□□□□□ -0.1
LRRC28-206ENST00000558471 BRCA2P51587 3418 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 LOC102724159A0A0B4J2E5 919 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 CPLX1O14810 134 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 SEPT4O43236 478 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 LARGE1O95461 756 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 PWP2Q15269 919 aaKnown RBP14.4□□□□□ -0.1
LRRC28-206ENST00000558471 PFKFB3Q16875 520 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-206ENST00000558471 ANO1Q5XXA6 986 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 FCHSD1Q86WN1 690 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 NSUN6Q8TEA1 469 aaKnown RBP14.4□□□□□ -0.1
LRRC28-206ENST00000558471 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
LRRC28-206ENST00000558471 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-206ENST00000558471 ZHX1Q9UKY1 873 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-206ENST00000558471 LRRC37A2A6NM11 1700 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 STXBP3O00186 592 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 MEIS2O14770 477 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 SCG2P13521 617 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 EDNRBP24530 442 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 RGS19P49795 217 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 NAPAP54920 295 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 AKAP17AQ02040 695 aaKnown RBP14.39□□□□□ -0.11
LRRC28-206ENST00000558471 RABEP1Q15276 862 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 USP17L6PQ6QN14 398 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 NECAB1Q8N987 351 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms