RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 ALKBH8Q96BT7 664 aaKnown RBP7.84□□□□□ -1.15
ZEB1-211ENST00000558440 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 EYA3Q99504 573 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 ZNF576Q9H609 170 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 DBNDD1Q9H9R9 158 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 PAPPA2Q9BXP8 1791 aa7.84□□□□□ -1.15
ZEB1-211ENST00000558440 SPEF2Q9C093 1822 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 CEP290O15078 2479 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 SOWAHDA6NJG2 315 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 ECE2O60344 883 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 CYP11A1P05108 521 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 MAOBP27338 520 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 GRIK1P39086 918 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 PTPN12Q05209 780 aaKnown RBP7.83□□□□□ -1.16
ZEB1-211ENST00000558440 TCIRG1Q13488 830 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 COPS6Q7L5N1 327 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 CCDC74AQ96AQ1 378 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 PLEKHF1Q96S99 279 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 MYH3P11055 1940 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 KIAA0100Q14667 2235 aaKnown RBP7.83□□□□□ -1.16
ZEB1-211ENST00000558440 HTTP42858 3142 aa7.83□□□□□ -1.16
ZEB1-211ENST00000558440 CTSBP07858 339 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 DRD2P14416 443 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 SOX4Q06945 474 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-211ENST00000558440 POU4F3Q15319 338 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 HP1BP3Q5SSJ5 553 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-211ENST00000558440 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-211ENST00000558440 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 CDCA5Q96FF9 252 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 TRIM56Q9BRZ2 755 aaKnown RBP7.82□□□□□ -1.16
ZEB1-211ENST00000558440 ABCB6Q9NP58 842 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 BABAM1Q9NWV8 329 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 GGA3Q9NZ52 723 aa7.82□□□□□ -1.16
ZEB1-211ENST00000558440 ADH5P11766 374 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 RIPK4P57078 832 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 GPSM2P81274 684 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 LMOD3Q0VAK6 560 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 CELF1Q92879 486 aaKnown RBP7.81□□□□□ -1.16
ZEB1-211ENST00000558440 MFSD14AQ96MC6 490 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
ZEB1-211ENST00000558440 ZFYVE1Q9HBF4 777 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 POLLQ9UGP5 575 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 HDAC9Q9UKV0 1011 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
ZEB1-211ENST00000558440 RTL9Q8NET4 1388 aa7.81□□□□□ -1.16
ZEB1-211ENST00000558440 COL4A1P02462 1669 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 FAM95CA0A1B0GW59 222 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 GADD45BO75293 160 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-211ENST00000558440 VIL1P09327 827 aaKnown RBP7.8□□□□□ -1.16
ZEB1-211ENST00000558440 SPINK2P20155 84 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 USP11P51784 963 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 FKBP1BP68106 108 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 SF3B3Q15393 1217 aaKnown RBP7.8□□□□□ -1.16
ZEB1-211ENST00000558440 PKN2Q16513 984 aaKnown RBP7.8□□□□□ -1.16
ZEB1-211ENST00000558440 ANGEL2Q5VTE6 544 aaKnown RBP7.8□□□□□ -1.16
ZEB1-211ENST00000558440 RASAL3Q86YV0 1011 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 FAM89AQ96GI7 184 aa7.8□□□□□ -1.16
ZEB1-211ENST00000558440 ASTN2O75129 1339 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-211ENST00000558440 BRCA2P51587 3418 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 PAX4O43316 350 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 UFL1O94874 794 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 BRD1O95696 1058 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 RPS8P62241 208 aaKnown RBP7.79□□□□□ -1.16
ZEB1-211ENST00000558440 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-211ENST00000558440 AGBL3Q8NEM8 1001 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 PLBD2Q8NHP8 589 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 FBLIM1Q8WUP2 373 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 EZH1Q92800 747 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-211ENST00000558440 CORO1BQ9BR76 489 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 YIPF2Q9BWQ6 316 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 CHPF2Q9P2E5 772 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 ECM29Q5VYK3 1845 aa7.79□□□□□ -1.16
ZEB1-211ENST00000558440 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
ZEB1-211ENST00000558440 ZNF609O15014 1411 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 ZNF646O15015 1829 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-211ENST00000558440 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-211ENST00000558440 ECEL1O95672 775 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
ZEB1-211ENST00000558440 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-211ENST00000558440 GRM2Q14416 872 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 NFKBIBQ15653 356 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 PAOXQ6QHF9 649 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 TMC7Q7Z402 723 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 GLIS3Q8NEA6 775 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 GIMAP7Q8NHV1 300 aa7.78□□□□□ -1.16
ZEB1-211ENST00000558440 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms