RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.14■□□□□ 0.33
AP4E1-202ENST00000558439 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 GOLGA6CA6NDK9 693 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 MOCS3O95396 460 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 GOLGA6DP0CG33 693 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.33
AP4E1-202ENST00000558439 NFIXQ14938 502 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 KRT26Q7Z3Y9 468 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 RDH13Q8NBN7 331 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 ATRIPQ8WXE1 791 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 VEZTQ9HBM0 779 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 GOLGA6AQ9NYA3 693 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
AP4E1-202ENST00000558439 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 SERPINB2P05120 415 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 GRAPQ13588 217 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
AP4E1-202ENST00000558439 AK8Q96MA6 479 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 OPA1O60313 960 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 CACNB3P54284 484 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 ZBED6P86452 979 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 CASP8Q14790 479 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 ASIC2Q16515 512 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 LAD1O00515 517 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 CEP104O60308 925 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 CFBP00751 764 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 TFRCP02786 760 aaKnown RBP17.13■□□□□ 0.33
AP4E1-202ENST00000558439 TRIM31Q9BZY9 425 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 THAP9Q9H5L6 903 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 DNM3Q9UQ16 869 aa17.13■□□□□ 0.33
AP4E1-202ENST00000558439 MEIS1O00470 390 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
AP4E1-202ENST00000558439 SNAP25P60880 206 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
AP4E1-202ENST00000558439 NDST4Q9H3R1 872 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 CD209Q9NNX6 404 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 BARHL2Q9NY43 387 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 GCNT3O95395 438 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 SLC7A5Q01650 507 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
AP4E1-202ENST00000558439 TRIM65Q6PJ69 517 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 SELENOOQ9BVL4 669 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 ATP2C2O75185 946 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 ADAM9Q13443 819 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 GRM4Q14833 912 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 TTC19Q6DKK2 380 aaPredicted RBP17.12■□□□□ 0.33
AP4E1-202ENST00000558439 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 INTS13Q9NVM9 706 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 MYO1AQ9UBC5 1043 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 ADAM21Q9UKJ8 722 aa17.12■□□□□ 0.33
AP4E1-202ENST00000558439 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
AP4E1-202ENST00000558439 STK4Q13043 487 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 SPICE1Q8N0Z3 855 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 SERPINB13Q9UIV8 391 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 TDP2O95551 362 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
AP4E1-202ENST00000558439 TNIP1Q15025 636 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 IFI16Q16666 785 aaKnown RBP17.11■□□□□ 0.33
AP4E1-202ENST00000558439 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 ATP8B1O43520 1251 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 EHHADHQ08426 723 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 CUEDC2Q9H467 287 aa17.11■□□□□ 0.33
AP4E1-202ENST00000558439 ZNF18P17022 549 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 A0A0U1RQJ8 604 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 SMIM23A6NLE4 172 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 KLK7P49862 253 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 VSNL1P62760 191 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 CETN1Q12798 172 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 RASGRP2Q7LDG7 609 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 GJA10Q969M2 543 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 WNT7AO00755 349 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 DDX12PQ92771 950 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 LIMA1Q9UHB6 759 aaKnown RBP17.1■□□□□ 0.33
AP4E1-202ENST00000558439 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
AP4E1-202ENST00000558439 ANKRD65E5RJM6 399 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
AP4E1-202ENST00000558439 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
AP4E1-202ENST00000558439 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms