RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 WNT8AQ9H1J5 351 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 PRRC2BQ5JSZ5 2229 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 REV3LO60673 3130 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
RABGGTA-204ENST00000558376 ASB14A6NK59 587 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 CABYRO75952 493 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 FDX1P10109 184 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 GNAT2P19087 354 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 MCCP23508 829 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 PSMC6P62333 389 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ADAMTS19Q8TE59 1207 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 B4GALT4O60513 344 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 ALAS1P13196 640 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 MYOGP15173 224 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 STAT2P52630 851 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 FAM160B2Q86V87 743 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
RABGGTA-204ENST00000558376 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
RABGGTA-204ENST00000558376 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
RABGGTA-204ENST00000558376 RASGRP2Q7LDG7 609 aa13.13□□□□□ -0.31
RABGGTA-204ENST00000558376 FBXO16Q8IX29 292 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-204ENST00000558376 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
RABGGTA-204ENST00000558376 PLA2G6O60733 806 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 SLC1A4P43007 532 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 IKQ13123 557 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 SCLYQ96I15 445 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 TRANK1O15050 2925 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 NMT2O60551 498 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 PDE4BQ07343 736 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 PPARAQ07869 468 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 Q9Y3F1 56 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
RABGGTA-204ENST00000558376 TET1Q8NFU7 2136 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 HIP1O00291 1037 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 ZEB2O60315 1214 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 NECAB3Q96P71 396 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-204ENST00000558376 RFXAPO00287 272 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 FOXP2O15409 715 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 CYP2C9P11712 490 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 NAPBQ9H115 298 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 BMP1P13497 986 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 SCN10AQ9Y5Y9 1956 aa13.1□□□□□ -0.31
RABGGTA-204ENST00000558376 EIF5BO60841 1220 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 SLC3A2P08195 630 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 HSPA4P34932 840 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 TFF2Q03403 129 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 PPP1R13LQ8WUF5 828 aa13.09□□□□□ -0.31
RABGGTA-204ENST00000558376 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms