RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 RETREG2Q8NC44 543 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 C7orf25Q9BPX7 421 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 NUP58Q9BVL2 599 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 DHX36Q9H2U1 1008 aaKnown RBP9.36□□□□□ -0.91
SPG11-209ENST00000558253 QTRT2Q9H974 415 aaKnown RBP9.36□□□□□ -0.91
SPG11-209ENST00000558253 INTS13Q9NVM9 706 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 MTMR4Q9NYA4 1195 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 MAGEC2Q9UBF1 373 aaPredicted RBP9.36□□□□□ -0.91
SPG11-209ENST00000558253 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 SYNPO2Q9UMS6 1093 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 PPP2R2CQ9Y2T4 447 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 MYH2Q9UKX2 1941 aa9.36□□□□□ -0.91
SPG11-209ENST00000558253 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 MYH6P13533 1939 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 BAZ2AQ9UIF9 1905 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 A0A1W2PQC6 194 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 CYTH3O43739 400 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 NCBP1Q09161 790 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 TRAF1Q13077 416 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 IL17AQ16552 155 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 TCP11X2Q5H9J9 407 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 SMIM5Q71RC9 77 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 APTXQ7Z2E3 356 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 TMEM139Q8IV31 216 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 GRAMD1CQ8IYS0 662 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 ADSSL1Q8N142 457 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 REXO1Q8N1G1 1221 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 CCDC24Q8N4L8 307 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 ZNF397Q8NF99 534 aaPredicted RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 SAMSN1Q9NSI8 373 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 MYO1AQ9UBC5 1043 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 SAP30BPQ9UHR5 308 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 DNAI1Q9UI46 699 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
SPG11-209ENST00000558253 DAGLAQ9Y4D2 1042 aa9.35□□□□□ -0.91
SPG11-209ENST00000558253 TAF1P21675 1872 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 TMEM232C9JQI7 657 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 N4BP3O15049 544 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 TUBBP07437 444 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 SRGNP10124 158 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 PDHBP11177 359 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 ADCY7P51828 1080 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 GTF2IP78347 998 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 DDR1Q08345 913 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 PSMD2Q13200 908 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 INF2Q27J81 1249 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 PPP4R3AQ6IN85 833 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 SYT10Q6XYQ8 523 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 CABP7Q86V35 215 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 REXO1L1PQ8IX06 675 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 GIMAP8Q8ND71 665 aaPredicted RBP9.34□□□□□ -0.91
SPG11-209ENST00000558253 NELFBQ8WX92 580 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
SPG11-209ENST00000558253 TEKT1Q969V4 418 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 CEP95Q96GE4 821 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 MASTLQ96GX5 879 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 MED15Q96RN5 788 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 ARGLU1Q9NWB6 273 aaPredicted RBP9.34□□□□□ -0.91
SPG11-209ENST00000558253 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 NAV1Q8NEY1 1877 aa9.34□□□□□ -0.91
SPG11-209ENST00000558253 LRRC37AA6NMS7 1700 aa9.34□□□□□ -0.92
SPG11-209ENST00000558253 ABCB11O95342 1321 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 SNED1Q8TER0 1413 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 EFCAB8A8MWE9 144 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 ATP8B1O43520 1251 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 MFAP3LO75121 409 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 CASQ1P31415 396 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 DNM2P50570 870 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
SPG11-209ENST00000558253 FAM193AP78312 1265 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 GRIK5Q16478 980 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 TXNRD1Q16881 649 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 ZNF827Q17R98 1081 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 STYK1Q6J9G0 422 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 TRIM65Q6PJ69 517 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 CYP26C1Q6V0L0 522 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
SPG11-209ENST00000558253 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
SPG11-209ENST00000558253 MNS1Q8NEH6 495 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 DCAF4Q8WV16 495 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 MKL1Q969V6 931 aa9.33□□□□□ -0.92
SPG11-209ENST00000558253 ZDHHC15Q96MV8 337 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms