RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 GNA11P29992 359 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 IRF5Q13568 498 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 OTOP1Q7RTM1 612 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 FAM184AQ8NB25 1140 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 USP6NLQ92738 828 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 CUL5Q93034 780 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 PSTPIP2Q9H939 334 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
LRRC28-204ENST00000558172 ADD3Q9UEY8 706 aaKnown RBP12.05□□□□□ -0.48
LRRC28-204ENST00000558172 DNAJC25-GNG10A0A024R161 153 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 LOC102724159A0A0B4J2E5 919 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 SMCO2A6NFE2 343 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 JAK2O60674 1132 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 PPFIA3O75145 1194 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 CFBP00751 764 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
LRRC28-204ENST00000558172 TAL1P17542 331 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-204ENST00000558172 FLT3LGP49771 235 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 HSD17B4P51659 736 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
LRRC28-204ENST00000558172 CAP1Q01518 475 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 PRKCZQ05513 592 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-204ENST00000558172 BECN1Q14457 450 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 PWP2Q15269 919 aaKnown RBP12.04□□□□□ -0.48
LRRC28-204ENST00000558172 MCTP2Q6DN12 878 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 GALNT17Q6IS24 598 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 RIC8AQ9NPQ8 531 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
LRRC28-204ENST00000558172 B4DLN1 442 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 OPLAHO14841 1288 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 CYP2B6P20813 491 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 CALML3P27482 149 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 ADCY7P51828 1080 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 NLRP5P59047 1200 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 TRIM29Q14134 588 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 ZNF792Q3KQV3 632 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
LRRC28-204ENST00000558172 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
LRRC28-204ENST00000558172 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 DNERQ8NFT8 737 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 TBC1D5Q92609 795 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
LRRC28-204ENST00000558172 APBA2Q99767 749 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
LRRC28-204ENST00000558172 KIAA1217Q5T5P2 1943 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 MEIS2O14770 477 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 COBLO75128 1261 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 FOSP01100 380 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-204ENST00000558172 PGK2P07205 417 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 SLC30A10Q6XR72 485 aa12.02□□□□□ -0.49
LRRC28-204ENST00000558172 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.49
LRRC28-204ENST00000558172 MYH7BA7E2Y1 1941 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 ASB14A6NK59 587 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 ADCY3O60266 1144 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
LRRC28-204ENST00000558172 GJB2P29033 226 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 OLFML2BQ68BL8 750 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-204ENST00000558172 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 NSUN6Q8TEA1 469 aaKnown RBP12.01□□□□□ -0.49
LRRC28-204ENST00000558172 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 PHF20Q9BVI0 1012 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 EHMT1Q9H9B1 1298 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
LRRC28-204ENST00000558172 SOWAHBA6NEL2 793 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 PDCP20941 246 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
LRRC28-204ENST00000558172 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
LRRC28-204ENST00000558172 ALDH5A1P51649 535 aaPredicted RBP12□□□□□ -0.49
LRRC28-204ENST00000558172 CNTN2Q02246 1040 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms