RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 PDE4DQ08499 809 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 DUSP28Q4G0W2 176 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 RASGRP2Q7LDG7 609 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 CDX2Q99626 313 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 KRT23Q9C075 422 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 GPHNQ9NQX3 736 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-204ENST00000558020 KDM4AO75164 1064 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 CD4P01730 458 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 CPT1AP50416 773 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 TBC1D10CQ8IV04 446 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 SLC43A3Q8NBI5 491 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 PNMA1Q8ND90 353 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 ZKSCAN3Q9BRR0 538 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 DSCC1Q9BVC3 393 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 MTIF3Q9H2K0 278 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 POLR3EQ9NVU0 708 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 ASTN1O14525 1302 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 RAD50Q92878 1312 aa15.94■□□□□ 0.14
SNRPA1-204ENST00000558020 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 KPNA6O60684 536 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 SUPT20HL2P0C7V6 817 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 CSF2RAP15509 400 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 RPS6P62753 249 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 PSRC1Q6PGN9 363 aaPredicted RBP15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 CLEC4DQ8WXI8 215 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 ANKS1AQ92625 1134 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 ZSCAN10Q96SZ4 725 aaPredicted RBP15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 PPP1R12CQ9BZL4 782 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 HIPK3Q9H422 1215 aa15.93■□□□□ 0.14
SNRPA1-204ENST00000558020 RBM47A0AV96 593 aaKnown RBP15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 MCF2L2Q86YR7 1114 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 SCFD2Q8WU76 684 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 UBAC1Q9BSL1 405 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 ZSWIM5Q9P217 1185 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 NEDD4P46934 1319 aa15.92■□□□□ 0.14
SNRPA1-204ENST00000558020 B4E1Z4 1266 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 GOLGA8HP0CJ92 632 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 CYP2C18P33260 490 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 USH1GQ495M9 461 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 TMEM240Q5SV17 173 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 SLC30A10Q6XR72 485 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 RPUSD2Q8IZ73 545 aaKnown RBP15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 OR6J1Q8NGC5 347 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 IL23AQ9NPF7 189 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 ABCB11O95342 1321 aa15.91■□□□□ 0.14
SNRPA1-204ENST00000558020 FGBP02675 491 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 FOSL2P15408 326 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 DNAJB2P25686 324 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 TRDNQ13061 729 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 ZNF365Q70YC5 407 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 C16orf59Q7L2K0 433 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 MAFAQ8NHW3 353 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 MTG1Q9BT17 334 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 TTYH1Q9H313 450 aaPredicted RBP15.9■□□□□ 0.14
SNRPA1-204ENST00000558020 MYL3P08590 195 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 ACRP10323 421 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 TXNP10599 105 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 TRAF1Q13077 416 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 TTLL4Q14679 1199 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 CDC37Q16543 378 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 ENAHQ8N8S7 591 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 NSUN6Q8TEA1 469 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 TIFAQ96CG3 184 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 ALDH8A1Q9H2A2 487 aaPredicted RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 GRIN2DO15399 1336 aa15.89■□□□□ 0.13
SNRPA1-204ENST00000558020 B4GALT4O60513 344 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 EDNRBP24530 442 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 PSMC6P62333 389 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 PURAQ00577 322 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 TMEM63BQ5T3F8 832 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 IFIT1BQ5T764 474 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 HERVK_113Q902F9 699 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 IWS1Q96ST2 819 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 NOC4LQ9BVI4 516 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 ZNF576Q9H609 170 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 MSRAQ9UJ68 235 aa15.88■□□□□ 0.13
SNRPA1-204ENST00000558020 TNKSO95271 1327 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms