RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 BCRP11274 1271 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-213ENST00000557765 HERVK_113P62684 666 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 ATP2C1P98194 919 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-213ENST00000557765 CCL15Q16663 113 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 CLMNQ96JQ2 1002 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 FAM20AQ96MK3 541 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 USP25Q9UHP3 1055 aa11.96□□□□□ -0.49
GABRB3-213ENST00000557765 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
GABRB3-213ENST00000557765 MYH15Q9Y2K3 1946 aa11.96□□□□□ -0.5
GABRB3-213ENST00000557765 LONP1P36776 959 aaKnown RBP11.95□□□□□ -0.5
GABRB3-213ENST00000557765 TXLNAP40222 546 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 TM4SF4P48230 202 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 NR5A1Q13285 461 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 MOGSQ13724 837 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 PDIA5Q14554 519 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 PIK3AP1Q6ZUJ8 805 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 KRI1Q8N9T8 703 aaKnown RBP11.95□□□□□ -0.5
GABRB3-213ENST00000557765 SMCR8Q8TEV9 937 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-213ENST00000557765 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 COA7Q96BR5 231 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 ATG4CQ96DT6 458 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 MBOAT7Q96N66 472 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 SPATC1LQ9H0A9 340 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 SLC5A4Q9NY91 659 aa11.95□□□□□ -0.5
GABRB3-213ENST00000557765 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
GABRB3-213ENST00000557765 RBBP6Q7Z6E9 1792 aaKnown RBP11.95□□□□□ -0.5
GABRB3-213ENST00000557765 RLFQ13129 1914 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 CTAGE5O15320 804 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 NEMFO60524 1076 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 MUTP22033 750 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 PTPREP23469 700 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 CMA1P23946 247 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 YY1P25490 414 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 MAPK4P31152 587 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 ME1P48163 572 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 TMEM266Q2M3C6 531 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 Q4G0T1 1027 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 KCNV1Q6PIU1 500 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 RNF207Q6ZRF8 634 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 GPRC5AQ8NFJ5 357 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 TBCKQ8TEA7 893 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 ANO3Q9BYT9 981 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 DDX19AQ9NUU7 478 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
GABRB3-213ENST00000557765 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
GABRB3-213ENST00000557765 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 PDHXO00330 501 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 MYL1P05976 194 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 HOXC6P09630 235 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 MAP2K2P36507 400 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 APLP1P51693 650 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 PTPAQ15257 358 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 USH1GQ495M9 461 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 PCNX4Q63HM2 1172 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 CCDC73Q6ZRK6 1079 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-213ENST00000557765 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-213ENST00000557765 CLEC4DQ8WXI8 215 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 TIGD1Q96MW7 591 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 FAM13BQ9NYF5 915 aa11.93□□□□□ -0.5
GABRB3-213ENST00000557765 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 FIBPO43427 364 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 CFBP00751 764 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 TGFB3P10600 412 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 ALAS1P13196 640 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 ERVK-9P63128 1117 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 ERVK-24P63145 666 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 KCTD2Q14681 263 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 GNPTABQ3T906 1256 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
GABRB3-213ENST00000557765 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
GABRB3-213ENST00000557765 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms