RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
CGRRF1-209ENST00000557755 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
CGRRF1-209ENST00000557755 CLDND1Q9NY35 253 aa13.39□□□□□ -0.27
CGRRF1-209ENST00000557755 H0Y858 1186 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 RAD9AQ99638 391 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 SEZ6LQ9BYH1 1024 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 TLR9Q9NR96 1032 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 SWAP70Q9UH65 585 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
CGRRF1-209ENST00000557755 MICAL3Q7RTP6 2002 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 E9PSI1 815 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 NDUFB10O96000 172 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 CHMP4BP1P59074 171 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 COL19A1Q14993 1142 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 EP300Q09472 2414 aaPredicted RBP13.37□□□□□ -0.27
CGRRF1-209ENST00000557755 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 MED19A0JLT2 244 aaPredicted RBP13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 NBNO60934 754 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 ZBED4O75132 1171 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 PDE6AP16499 860 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 SMAD2Q15796 467 aaKnown RBP13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 IQSEC1Q6DN90 963 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 KIAA1211Q6ZU35 1233 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 FBXL6Q8N531 539 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 PRPF38AQ8NAV1 312 aaKnown RBP13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 GREB1LQ9C091 1923 aaPredicted RBP13.36□□□□□ -0.27
CGRRF1-209ENST00000557755 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 F5H6K3 240 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 MBTPS2O43462 519 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 KLRC3Q07444 240 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 OS9Q13438 667 aaPredicted RBP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 TIGD5Q53EQ6 642 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 DHX38Q92620 1227 aaKnown RBP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 EAF2Q96CJ1 260 aaPredicted RBP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 CCDC17Q96LX7 622 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 FAM50BQ9Y247 325 aa13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
CGRRF1-209ENST00000557755 SPTBN2O15020 2390 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 PRR23AA6NEV1 266 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 ASB14A6NK59 587 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 CSPG5O95196 566 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 GNAI3P08754 354 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 ID4P47928 161 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 SNAP25P60880 206 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 ZXDAP98168 799 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 BFSP2Q13515 415 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 SLC9C2Q5TAH2 1124 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 PRRX2Q99811 253 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 POLR3EQ9NVU0 708 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 Q9Y3F1 56 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 MYO15AQ9UKN7 3530 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
CGRRF1-209ENST00000557755 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 USP17L21D6R901 530 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 STXBP3O00186 592 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 LINC01565O15544 149 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 IGSF3O75054 1194 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 TBX10O75333 385 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 CHGBP05060 677 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 AVPR2P30518 371 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 GPM6BQ13491 265 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 PTGISQ16647 500 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 PTPROQ16827 1216 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 DUSP28Q4G0W2 176 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
CGRRF1-209ENST00000557755 COPS5Q92905 334 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms