RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 OAZ1P54368 228 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 NTRK3Q16288 839 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 NFXL1Q6ZNB6 911 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD8-214ENST00000557727 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 RIOX2Q8IUF8 465 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 CMTR1Q8N1G2 835 aaKnown RBP10.5□□□□□ -0.73
CHD8-214ENST00000557727 SHCBP1Q8NEM2 672 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 NUP133Q8WUM0 1156 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 USP6NLQ92738 828 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 SPZ1Q9BXG8 430 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 CNTNAP5Q8WYK1 1306 aa10.5□□□□□ -0.73
CHD8-214ENST00000557727 GOLGA8BA8MQT2 603 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 OPLAHO14841 1288 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 ZBTB43O43298 467 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 IGHA2P01877 340 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 ICAM1P05362 532 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 CALM1P0DP23 149 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 CALM2P0DP24 149 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 CALM3P0DP25 149 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 FDX1P10109 184 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 SMARCA1P28370 1054 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 NEK4P51957 841 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 CDC37Q16543 378 aaPredicted RBP10.49□□□□□ -0.73
CHD8-214ENST00000557727 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 Q6ZNB5 142 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 ZNF274Q96GC6 653 aaPredicted RBP10.49□□□□□ -0.73
CHD8-214ENST00000557727 MTRQ99707 1265 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 TEX13BQ9BXU2 312 aa10.49□□□□□ -0.73
CHD8-214ENST00000557727 RAVER2Q9HCJ3 691 aaKnown RBP10.49□□□□□ -0.73
CHD8-214ENST00000557727 ERCC3P19447 782 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 STAT3P40763 770 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 PSMC4P43686 418 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 ME3Q16798 604 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 MORN1Q5T089 497 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 SNRNP48Q6IEG0 339 aaKnown RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 GPR142Q7Z601 462 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 CTCFLQ8NI51 663 aaPredicted RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 CLEC4DQ8WXI8 215 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 GABRQQ9UN88 632 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 FRMPD3Q5JV73 1810 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 BRCA2P51587 3418 aa10.48□□□□□ -0.73
CHD8-214ENST00000557727 KIAA0100Q14667 2235 aaKnown RBP10.48□□□□□ -0.73
CHD8-214ENST00000557727 GOLGA8AA7E2F4 631 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 PFKFB2O60825 505 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 ZBED4O75132 1171 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 CTDNEP1O95476 244 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 MAPK4P31152 587 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 KIF5BP33176 963 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 FCGRTP55899 365 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 SCRN1Q12765 414 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 IKQ13123 557 aaPredicted RBP10.47□□□□□ -0.73
CHD8-214ENST00000557727 GRB14Q14449 540 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 RABEP1Q15276 862 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 RTN1Q16799 776 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 MUM1L1Q5H9M0 696 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 CCDC174Q6PII3 467 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 CPXCR1Q8N123 301 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 FGD4Q96M96 766 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 PIGSQ96S52 555 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 LZTS2Q9BRK4 669 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 MROH8Q9H579 483 aa10.47□□□□□ -0.73
CHD8-214ENST00000557727 RBM28Q9NW13 759 aaKnown RBP10.47□□□□□ -0.73
CHD8-214ENST00000557727 ISY1Q9ULR0 285 aaKnown RBP10.47□□□□□ -0.73
CHD8-214ENST00000557727 KIAA1217Q5T5P2 1943 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 DNAJC25-GNG10A0A024R161 153 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 NFIBO00712 420 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 ZBTB5O15062 677 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 COBLO75128 1261 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 SLC25A27O95847 323 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHD8-214ENST00000557727 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.73
CHD8-214ENST00000557727 CCNA1P78396 465 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 FGD1P98174 961 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 GHRHRQ02643 423 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 PRKCZQ05513 592 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 PLS1Q14651 629 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 PKN1Q16512 942 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 PLEKHH3Q7Z736 793 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
CHD8-214ENST00000557727 UPF2Q9HAU5 1272 aaKnown RBP10.46□□□□□ -0.73
CHD8-214ENST00000557727 VAT1LQ9HCJ6 419 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 SRRDQ9UH36 339 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 ASTN1O14525 1302 aa10.46□□□□□ -0.73
CHD8-214ENST00000557727 MYH7BA7E2Y1 1941 aa10.46□□□□□ -0.74
CHD8-214ENST00000557727 PNMA6FA0A0J9YX94 578 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 SLC15A5A6NIM6 579 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 TNPO2O14787 897 aaKnown RBP10.45□□□□□ -0.74
CHD8-214ENST00000557727 DTNBO60941 627 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms