RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 USP17L12C9JPN9 530 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 USP17L21D6R901 530 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 RBAK-RBAKDNI3L0D1 243 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 PRKAB2O43741 272 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 CXCL10P02778 98 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 BFSP2Q13515 415 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 TCEAL5Q5H9L2 206 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 LCORLQ8N3X6 602 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 BANK1Q8NDB2 785 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 PPP1R13LQ8WUF5 828 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 A1CFQ9NQ94 594 aaKnown RBP12.07□□□□□ -0.48
ABCD4-227ENST00000557554 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
ABCD4-227ENST00000557554 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
ABCD4-227ENST00000557554 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
ABCD4-227ENST00000557554 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 NBNO60934 754 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 NDUFB10O96000 172 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 GNAI2P04899 355 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 PDE6AP16499 860 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 PTPN11Q06124 597 aaPredicted RBP12.06□□□□□ -0.48
ABCD4-227ENST00000557554 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
ABCD4-227ENST00000557554 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 ASCL5Q7RTU5 278 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
ABCD4-227ENST00000557554 FBXL6Q8N531 539 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
ABCD4-227ENST00000557554 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
ABCD4-227ENST00000557554 RBM47A0AV96 593 aaKnown RBP12.05□□□□□ -0.48
ABCD4-227ENST00000557554 H3BNC9 293 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 MBTPS2O43462 519 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 RAD21O60216 631 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 HTRA4P83105 476 aaPredicted RBP12.05□□□□□ -0.48
ABCD4-227ENST00000557554 DLX2Q07687 328 aaPredicted RBP12.05□□□□□ -0.48
ABCD4-227ENST00000557554 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 KIAA1211Q6ZU35 1233 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
ABCD4-227ENST00000557554 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 HOMER2Q9NSB8 354 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
ABCD4-227ENST00000557554 INSL6Q9Y581 213 aa12.05□□□□□ -0.48
ABCD4-227ENST00000557554 LCTP09848 1927 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 MYL3P08590 195 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ZXDAP98168 799 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 RBL2Q08999 1139 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 PTPROQ16827 1216 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 TRMT2AQ8IZ69 625 aaKnown RBP12.04□□□□□ -0.48
ABCD4-227ENST00000557554 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
ABCD4-227ENST00000557554 MKL1Q969V6 931 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
ABCD4-227ENST00000557554 POP1Q99575 1024 aaKnown RBP12.04□□□□□ -0.48
ABCD4-227ENST00000557554 IRF2BPLQ9H1B7 796 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ACAD9Q9H845 621 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ARMT1Q9H993 441 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 VTA1Q9NP79 307 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ATP8A2Q9NTI2 1148 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 VPS13AQ96RL7 3174 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 ZNF532Q9HCE3 1301 aa12.04□□□□□ -0.48
ABCD4-227ENST00000557554 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 A6NJR5 290 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 SELPP16109 830 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 AVPR2P30518 371 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 CPT1AP50416 773 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 SUGP1Q8IWZ8 645 aaKnown RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 DHX38Q92620 1227 aaKnown RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 ASIC4Q96FT7 647 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 WDR11Q9BZH6 1224 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
ABCD4-227ENST00000557554 CLDND1Q9NY35 253 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 CYP39A1Q9NYL5 469 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 ATG2AQ2TAZ0 1938 aa12.03□□□□□ -0.48
ABCD4-227ENST00000557554 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 H0Y858 1186 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 NCK2O43639 380 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 KPNA6O60684 536 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 EFCAB14O75071 495 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.49
ABCD4-227ENST00000557554 IKBKEQ14164 716 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 PTGISQ16647 500 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 FAM117BQ6P1L5 589 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 CTR9Q6PD62 1173 aa12.02□□□□□ -0.49
ABCD4-227ENST00000557554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms