RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 NAPBQ9H115 298 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 WNT8AQ9H1J5 351 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 ZNF536O15090 1300 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 TNKSO95271 1327 aa12.1□□□□□ -0.47
RDH11-210ENST00000557331 RBM47A0AV96 593 aaKnown RBP12.09□□□□□ -0.47
RDH11-210ENST00000557331 PRDM1O75626 825 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 MCCP23508 829 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
RDH11-210ENST00000557331 DCAF4Q8WV16 495 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 HLA-CQ95604 372 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 MTCH2Q9Y6C9 303 aa12.09□□□□□ -0.47
RDH11-210ENST00000557331 TSPY2A6NKD2 308 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 RABGGTBP53611 331 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 PURAQ00577 322 aaKnown RBP12.08□□□□□ -0.48
RDH11-210ENST00000557331 PPARAQ07869 468 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 NSMFQ6X4W1 530 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 CAGE1Q8TC20 777 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 SCFD2Q8WU76 684 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
RDH11-210ENST00000557331 A6NJR5 290 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 EFCAB14O75071 495 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 CHGBP05060 677 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 CA3P07451 260 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
RDH11-210ENST00000557331 EPB41L4AQ9HCS5 686 aaPredicted RBP12.07□□□□□ -0.48
RDH11-210ENST00000557331 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
RDH11-210ENST00000557331 REV3LO60673 3130 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
RDH11-210ENST00000557331 KCNJ6P48051 423 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 NOVP48745 357 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 NT5C2P49902 561 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 ALDH5A1P51649 535 aaPredicted RBP12.06□□□□□ -0.48
RDH11-210ENST00000557331 PSMC6P62333 389 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 KCTD1Q719H9 257 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 HERC6Q8IVU3 1022 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 AFAP1L1Q8TED9 768 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 SCLYQ96I15 445 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 FTOQ9C0B1 505 aaKnown RBP eCLIP12.06□□□□□ -0.48
RDH11-210ENST00000557331 RANBP17Q9H2T7 1088 aaKnown RBP12.06□□□□□ -0.48
RDH11-210ENST00000557331 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
RDH11-210ENST00000557331 TRMT13Q9NUP7 481 aaKnown RBP12.06□□□□□ -0.48
RDH11-210ENST00000557331 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
RDH11-210ENST00000557331 TLL1O43897 1013 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 GPR37L1O60883 481 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 MYL3P08590 195 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
RDH11-210ENST00000557331 TAP1Q03518 808 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 PDE4DQ08499 809 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 BAATQ14032 418 aaPredicted RBP12.05□□□□□ -0.48
RDH11-210ENST00000557331 NBPF20Q3BBV1 942 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 FAM47CQ5HY64 1035 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 DEFB128Q7Z7B8 93 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 SCN10AQ9Y5Y9 1956 aa12.05□□□□□ -0.48
RDH11-210ENST00000557331 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 M0R2C6 588 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 ORC4O43929 436 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
RDH11-210ENST00000557331 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
RDH11-210ENST00000557331 CYP2C9P11712 490 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 MYOGP15173 224 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 TFF2Q03403 129 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 RNF207Q6ZRF8 634 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 SESTD1Q86VW0 696 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 VWCEQ96DN2 955 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 TTC14Q96N46 770 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 LRFN3Q9BTN0 628 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
RDH11-210ENST00000557331 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 GBF1Q92538 1859 aa12.04□□□□□ -0.48
RDH11-210ENST00000557331 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
RDH11-210ENST00000557331 SMARCA5O60264 1052 aaPredicted RBP12.03□□□□□ -0.48
RDH11-210ENST00000557331 FGRP09769 529 aa12.03□□□□□ -0.48
RDH11-210ENST00000557331 EDNRBP24530 442 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms