RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
LGMN-215ENST00000557315 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 CTAGE5O15320 804 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
LGMN-215ENST00000557315 CALML3P27482 149 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 HSD17B4P51659 736 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 ACVR2BQ13705 512 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 TOB2Q14106 344 aaPredicted RBP16.66■□□□□ 0.26
LGMN-215ENST00000557315 TAPT1Q6NXT6 567 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 PIBF1Q8WXW3 757 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 IL17RAQ96F46 866 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
LGMN-215ENST00000557315 PNMA6FA0A0J9YX94 578 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 MYADML2A6NDP7 307 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 MSCO60682 206 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
LGMN-215ENST00000557315 CAPN2P17655 700 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 CCDC144BQ3MJ40 725 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
LGMN-215ENST00000557315 CTCFLQ8NI51 663 aaPredicted RBP16.65■□□□□ 0.26
LGMN-215ENST00000557315 BRF1Q92994 677 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
LGMN-215ENST00000557315 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
LGMN-215ENST00000557315 CEP290O15078 2479 aa16.64■□□□□ 0.26
LGMN-215ENST00000557315 AKR1A1P14550 325 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 KIF5BP33176 963 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 EVCP57679 992 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 LRRC41Q15345 812 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
LGMN-215ENST00000557315 HTATIP2Q9BUP3 242 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.25
LGMN-215ENST00000557315 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
LGMN-215ENST00000557315 MRPL11Q9Y3B7 192 aaKnown RBP16.64■□□□□ 0.25
LGMN-215ENST00000557315 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
LGMN-215ENST00000557315 ASB14A6NK59 587 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 H0YGN5 161 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 ZBTB43O43298 467 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 PGK1P00558 417 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 CALM1P0DP23 149 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 CALM2P0DP24 149 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 CALM3P0DP25 149 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 CCSAPQ6IQ19 270 aaPredicted RBP16.63■□□□□ 0.25
LGMN-215ENST00000557315 TYW1BQ6NUM6 668 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 KLHDC9Q8NEP7 349 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
LGMN-215ENST00000557315 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
LGMN-215ENST00000557315 DNM1LO00429 736 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
LGMN-215ENST00000557315 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
LGMN-215ENST00000557315 RCAN1P53805 252 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 NKX3-2P78367 333 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 RTN1Q16799 776 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 NECAB2Q7Z6G3 386 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 DNERQ8NFT8 737 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 IL31RAQ8NI17 732 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 DPF3Q92784 378 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 LZTS2Q9BRK4 669 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 MAF1Q9H063 256 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 UPF3AQ9H1J1 476 aaKnown RBP16.62■□□□□ 0.25
LGMN-215ENST00000557315 C11orf49Q9H6J7 331 aa16.62■□□□□ 0.25
LGMN-215ENST00000557315 RANBP2P49792 3224 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 GOLGA8AA7E2F4 631 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 GOLGA8BA8MQT2 603 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 CFBP00751 764 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 SMPD1P17405 629 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 GNAQP50148 359 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 NTRK3Q16288 839 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 LRRC26Q2I0M4 334 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 XPNPEP3Q9NQH7 507 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
LGMN-215ENST00000557315 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 FRMPD4Q14CM0 1322 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 DOCK5Q9H7D0 1870 aa16.61■□□□□ 0.25
LGMN-215ENST00000557315 MEIS2O14770 477 aa16.6■□□□□ 0.25
LGMN-215ENST00000557315 ADAMTS3O15072 1205 aa16.6■□□□□ 0.25
LGMN-215ENST00000557315 DUSP11O75319 330 aaKnown RBP16.6■□□□□ 0.25
LGMN-215ENST00000557315 ARIH2O95376 493 aa16.6■□□□□ 0.25
LGMN-215ENST00000557315 RARBP10826 455 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms