RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 TAF6LQ9Y6J9 622 aa26.46■■□□□ 1.83
TMEM260-214ENST00000556975 ABCB11O95342 1321 aa26.45■■□□□ 1.83
TMEM260-214ENST00000556975 CLTBP09497 229 aa26.45■■□□□ 1.82
TMEM260-214ENST00000556975 CDK7P50613 346 aa26.45■■□□□ 1.82
TMEM260-214ENST00000556975 GPR153Q6NV75 609 aa26.45■■□□□ 1.82
TMEM260-214ENST00000556975 NOL8Q76FK4 1167 aaKnown RBP26.45■■□□□ 1.82
TMEM260-214ENST00000556975 TLK2Q86UE8 772 aa26.45■■□□□ 1.82
TMEM260-214ENST00000556975 STAG2Q8N3U4 1231 aa26.45■■□□□ 1.82
TMEM260-214ENST00000556975 RBM47A0AV96 593 aaKnown RBP26.44■■□□□ 1.82
TMEM260-214ENST00000556975 PALM3A6NDB9 673 aaPredicted RBP26.44■■□□□ 1.82
TMEM260-214ENST00000556975 EDNRBP24530 442 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 QRICH1Q2TAL8 776 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 KIAA1211Q6ZU35 1233 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 STOX1Q6ZVD7 989 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 RALYLQ86SE5 291 aaKnown RBP26.44■■□□□ 1.82
TMEM260-214ENST00000556975 MPHOSPH6Q99547 160 aaKnown RBP26.44■■□□□ 1.82
TMEM260-214ENST00000556975 AP5M1Q9H0R1 490 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 MAD2L2Q9UI95 211 aa26.44■■□□□ 1.82
TMEM260-214ENST00000556975 RBM8AQ9Y5S9 174 aaKnown RBP26.44■■□□□ 1.82
TMEM260-214ENST00000556975 KLRF2D3W0D1 207 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 IFIT3O14879 490 aaKnown RBP26.43■■□□□ 1.82
TMEM260-214ENST00000556975 KIAA0355O15063 1070 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 DYNC1LI2O43237 492 aaPredicted RBP26.43■■□□□ 1.82
TMEM260-214ENST00000556975 PQBP1O60828 265 aaKnown RBP26.43■■□□□ 1.82
TMEM260-214ENST00000556975 FAAP100Q0VG06 881 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 BADQ92934 168 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 MTMR8Q96EF0 704 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 COL6A3P12111 3177 aa26.43■■□□□ 1.82
TMEM260-214ENST00000556975 MROH7Q68CQ1 1323 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 ERICH2A1L162 156 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 DCDC2CA8MYV0 355 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 B4DLN1 442 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 MRPL12P52815 198 aaKnown RBP26.42■■□□□ 1.82
TMEM260-214ENST00000556975 BEX3Q00994 111 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 FSCN1Q16658 493 aaKnown RBP26.42■■□□□ 1.82
TMEM260-214ENST00000556975 DUSP28Q4G0W2 176 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 FBXO11Q86XK2 927 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 MCF2L2Q86YR7 1114 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 VAT1LQ9HCJ6 419 aa26.42■■□□□ 1.82
TMEM260-214ENST00000556975 MRPL11Q9Y3B7 192 aaKnown RBP26.42■■□□□ 1.82
TMEM260-214ENST00000556975 A0A0U1RQG5 324 aaPredicted RBP26.41■■□□□ 1.82
TMEM260-214ENST00000556975 ARVCFO00192 962 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 DHX16O60231 1041 aaKnown RBP26.41■■□□□ 1.82
TMEM260-214ENST00000556975 CABYRO75952 493 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 WTAPQ15007 396 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 SART3Q15020 963 aaKnown RBP26.41■■□□□ 1.82
TMEM260-214ENST00000556975 BMP2KLQ5H9B9 411 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 TMEM63BQ5T3F8 832 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 MB21D2Q8IYB1 491 aaPredicted RBP26.41■■□□□ 1.82
TMEM260-214ENST00000556975 TBC1D5Q92609 795 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 ESYT1Q9BSJ8 1104 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 WDR11Q9BZH6 1224 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 LSG1Q9H089 658 aaKnown RBP26.41■■□□□ 1.82
TMEM260-214ENST00000556975 MYH6P13533 1939 aa26.41■■□□□ 1.82
TMEM260-214ENST00000556975 ZEB2O60315 1214 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 ITGB8P26012 769 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 PDE4DQ08499 809 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 TROAPQ12815 778 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 GRM4Q14833 912 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 IGDCC4Q8TDY8 1250 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 VTI1AQ96AJ9 217 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 MTA3Q9BTC8 594 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 AMNQ9BXJ7 453 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 TMEM39AQ9NV64 488 aa26.4■■□□□ 1.82
TMEM260-214ENST00000556975 PTGS1P23219 599 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 ANTXR2P58335 489 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 SLC43A3Q8NBI5 491 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 SYTL5Q8TDW5 730 aaPredicted RBP26.39■■□□□ 1.82
TMEM260-214ENST00000556975 SEZ6LQ9BYH1 1024 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 RIOX1Q9H6W3 641 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 SENP2Q9HC62 589 aa26.39■■□□□ 1.82
TMEM260-214ENST00000556975 CXCL17Q6UXB2 119 aa26.38■■□□□ 1.81
TMEM260-214ENST00000556975 CHST3Q7LGC8 479 aa26.38■■□□□ 1.81
TMEM260-214ENST00000556975 A0A0C4DFX4 3053 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 ZBTB5O15062 677 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 NKRFO15226 690 aaKnown RBP eCLIP26.37■■□□□ 1.81
TMEM260-214ENST00000556975 RAG1P15918 1043 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 GHRHRQ02643 423 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 TMEM67Q5HYA8 995 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 SCFD2Q8WU76 684 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 TAAR1Q96RJ0 339 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 TBX21Q9UL17 535 aa26.37■■□□□ 1.81
TMEM260-214ENST00000556975 NECTIN1Q15223 517 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 SLC35G1Q2M3R5 365 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 FAM126BQ8IXS8 530 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 SAMD3Q8N6K7 520 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 SLC17A8Q8NDX2 589 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 NSUN6Q8TEA1 469 aaKnown RBP26.36■■□□□ 1.81
TMEM260-214ENST00000556975 IWS1Q96ST2 819 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 MAP3K14Q99558 947 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 MAP3K20Q9NYL2 800 aaKnown RBP26.36■■□□□ 1.81
TMEM260-214ENST00000556975 COL20A1Q9P218 1284 aa26.36■■□□□ 1.81
TMEM260-214ENST00000556975 OPLAHO14841 1288 aa26.35■■□□□ 1.81
TMEM260-214ENST00000556975 PPP1R11O60927 126 aaPredicted RBP26.35■■□□□ 1.81
TMEM260-214ENST00000556975 TIMP1P01033 207 aa26.35■■□□□ 1.81
TMEM260-214ENST00000556975 TRAF1Q13077 416 aa26.35■■□□□ 1.81
TMEM260-214ENST00000556975 SHHQ15465 462 aa26.35■■□□□ 1.81
TMEM260-214ENST00000556975 CATIPQ7Z7H3 387 aa26.35■■□□□ 1.81
TMEM260-214ENST00000556975 SLC27A2O14975 620 aa26.34■■□□□ 1.81
TMEM260-214ENST00000556975 TLR3O15455 904 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms