RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SRCIN1Q9C0H9 1055 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 TRPV6Q9H1D0 765 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ALG13Q9NP73 1137 aaKnown RBP7.07□□□□□ -1.28
ATXN3-245ENST00000556958 MTUS1Q9ULD2 1270 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 ZNF318Q5VUA4 2279 aa7.07□□□□□ -1.28
ATXN3-245ENST00000556958 FAM186AA6NE01 2351 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
ATXN3-245ENST00000556958 ACACBO00763 2458 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 F6X3S4 739 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 TRIM66O15016 1216 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 B4GALT4O60513 344 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 NKX3-2P78367 333 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 CXCL17Q6UXB2 119 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
ATXN3-245ENST00000556958 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 VWCEQ96DN2 955 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 DDX11Q96FC9 970 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 ABHD16BQ9H3Z7 469 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 BICC1Q9H694 974 aaKnown RBP7.06□□□□□ -1.28
ATXN3-245ENST00000556958 DNAJC18Q9H819 358 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 CLDND1Q9NY35 253 aa7.06□□□□□ -1.28
ATXN3-245ENST00000556958 GVINP1Q7Z2Y8 2422 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-245ENST00000556958 ADH1BP00325 375 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 PHKA1P46020 1223 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 VCPP55072 806 aaKnown RBP7.05□□□□□ -1.28
ATXN3-245ENST00000556958 COL19A1Q14993 1142 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 ABCB5Q2M3G0 1257 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 CCDC144BQ3MJ40 725 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 CERKLQ49MI3 558 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-245ENST00000556958 CCDC102BQ68D86 513 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 PADI6Q6TGC4 694 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 MAMDC4Q6UXC1 1216 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 TTC13Q8NBP0 860 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 ACER1Q8TDN7 264 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 KAZALD1Q96I82 304 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 AP5M1Q9H0R1 490 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 RAI14Q9P0K7 980 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 PALD1Q9ULE6 856 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 TRANK1O15050 2925 aa7.05□□□□□ -1.28
ATXN3-245ENST00000556958 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 LCHNA4D1U4 455 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 LINC01553A4QN01 128 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 MBTPS2O43462 519 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 EFCAB14O75071 495 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 FLOT1O75955 427 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 NBPF7P0C2Y1 421 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 STAT3P40763 770 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 PDE4DQ08499 809 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SMAD4Q13485 552 aaKnown RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 BFSP2Q13515 415 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 RASGRF1Q13972 1273 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SHROOM1Q2M3G4 852 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 TCEAL5Q5H9L2 206 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 TATDN1Q6P1N9 297 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SLC4A10Q6U841 1118 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SPRED2Q7Z698 418 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 FRMD5Q7Z6J6 570 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 RIOX2Q8IUF8 465 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 MAGEB6Q8N7X4 407 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 KLHDC4Q8TBB5 520 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 TGFBRAP1Q8WUH2 860 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 NSUN4Q96CB9 384 aaKnown RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 ALDH8A1Q9H2A2 487 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 ADAMTS8Q9UP79 889 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 PLXNA1Q9UIW2 1896 aa7.04□□□□□ -1.28
ATXN3-245ENST00000556958 ANKRD11Q6UB99 2663 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-245ENST00000556958 DLG5Q8TDM6 1919 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 KMT2BQ9UMN6 2715 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-245ENST00000556958 APAF1O14727 1248 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 GJB5O95377 273 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 IQCF3P0C7M6 154 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 CYP2C9P11712 490 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 SDHBP21912 280 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 BEX3Q00994 111 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 TNFAIP2Q03169 654 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 TMEM132BQ14DG7 1078 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 RALBP1Q15311 655 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 FSCN1Q16658 493 aaKnown RBP7.03□□□□□ -1.28
ATXN3-245ENST00000556958 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 LRRFIP1Q32MZ4 808 aaKnown RBP7.03□□□□□ -1.28
ATXN3-245ENST00000556958 MAPKAPK5Q8IW41 473 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 ANKRD44Q8N8A2 993 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 KCNG4Q8TDN1 519 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 TSR2Q969E8 191 aaKnown RBP7.03□□□□□ -1.28
ATXN3-245ENST00000556958 ATG4CQ96DT6 458 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 ASIC4Q96FT7 647 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 SLC6A16Q9GZN6 736 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 LRP2BPQ9P2M1 347 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 REV3LO60673 3130 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 LOC285556D6RIA3 1793 aa7.03□□□□□ -1.28
ATXN3-245ENST00000556958 GRIN2DO15399 1336 aa7.02□□□□□ -1.28
ATXN3-245ENST00000556958 SPEF2Q9C093 1822 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 ABHD14A-ACY1A0A1B0GW23 586 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms