RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PCDHA1Q9Y5I3 950 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 RARBP10826 455 aa26.51■■□□□ 1.83
TDP1-216ENST00000556867 RPS6KB1P23443 525 aa26.51■■□□□ 1.83
TDP1-216ENST00000556867 RAB11FIP4Q86YS3 637 aa26.51■■□□□ 1.83
TDP1-216ENST00000556867 FAM184BQ9ULE4 1060 aa26.51■■□□□ 1.83
TDP1-216ENST00000556867 OPLAHO14841 1288 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 CASTP20810 708 aaKnown RBP26.5■■□□□ 1.83
TDP1-216ENST00000556867 RCAN1P53805 252 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 GHRHRQ02643 423 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 TMTC3Q6ZXV5 915 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 FBXL16Q8N461 479 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 SRBD1Q8N5C6 995 aaKnown RBP26.5■■□□□ 1.83
TDP1-216ENST00000556867 DNERQ8NFT8 737 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 C11orf49Q9H6J7 331 aa26.5■■□□□ 1.83
TDP1-216ENST00000556867 DNM1LO00429 736 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 ZBTB43O43298 467 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 COL6A1P12109 1028 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 FGD1P98174 961 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 Q6ZUG5 572 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 ARRDC4Q8NCT1 418 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 SYTL5Q8TDW5 730 aaPredicted RBP26.49■■□□□ 1.83
TDP1-216ENST00000556867 TBC1D5Q92609 795 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 RRP36Q96EU6 259 aaKnown RBP26.49■■□□□ 1.83
TDP1-216ENST00000556867 XPNPEP3Q9NQH7 507 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 DDX49Q9Y6V7 483 aaKnown RBP26.49■■□□□ 1.83
TDP1-216ENST00000556867 ALPK3Q96L96 1907 aa26.49■■□□□ 1.83
TDP1-216ENST00000556867 KLF18A0A0U1RQI7 1052 aa26.48■■□□□ 1.83
TDP1-216ENST00000556867 CCDC144BQ3MJ40 725 aa26.48■■□□□ 1.83
TDP1-216ENST00000556867 AGXT2Q9BYV1 514 aa26.48■■□□□ 1.83
TDP1-216ENST00000556867 TM6SF1Q9BZW5 370 aa26.48■■□□□ 1.83
TDP1-216ENST00000556867 RBM28Q9NW13 759 aaKnown RBP26.48■■□□□ 1.83
TDP1-216ENST00000556867 EIF5BO60841 1220 aaKnown RBP26.47■■□□□ 1.83
TDP1-216ENST00000556867 EDNRBP24530 442 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 HSD17B4P51659 736 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 SAMD3Q8N6K7 520 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 PIBF1Q8WXW3 757 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 LENG1Q96BZ8 264 aaPredicted RBP26.47■■□□□ 1.83
TDP1-216ENST00000556867 MPHOSPH6Q99547 160 aaKnown RBP26.47■■□□□ 1.83
TDP1-216ENST00000556867 ZSWIM6Q9HCJ5 1215 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 VTA1Q9NP79 307 aa26.47■■□□□ 1.83
TDP1-216ENST00000556867 MAP3K20Q9NYL2 800 aaKnown RBP26.47■■□□□ 1.83
TDP1-216ENST00000556867 SEC63Q9UGP8 760 aaKnown RBP26.47■■□□□ 1.83
TDP1-216ENST00000556867 DUSP11O75319 330 aaKnown RBP26.46■■□□□ 1.83
TDP1-216ENST00000556867 LRRC41Q15345 812 aa26.46■■□□□ 1.83
TDP1-216ENST00000556867 RTN1Q16799 776 aa26.46■■□□□ 1.83
TDP1-216ENST00000556867 GJC2Q5T442 439 aaPredicted RBP26.46■■□□□ 1.83
TDP1-216ENST00000556867 RUFY3Q7L099 469 aa26.46■■□□□ 1.83
TDP1-216ENST00000556867 CMTR1Q8N1G2 835 aaKnown RBP26.46■■□□□ 1.83
TDP1-216ENST00000556867 BRF1Q92994 677 aa26.46■■□□□ 1.83
TDP1-216ENST00000556867 COL20A1Q9P218 1284 aa26.46■■□□□ 1.83
TDP1-216ENST00000556867 GOLGA8AA7E2F4 631 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 GOLGA8BA8MQT2 603 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 KBTBD13C9JR72 458 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 ADCY6O43306 1168 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 CFBP00751 764 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 FBXO16Q8IX29 292 aaPredicted RBP26.45■■□□□ 1.82
TDP1-216ENST00000556867 CEP290O15078 2479 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 NID2Q14112 1375 aa26.45■■□□□ 1.82
TDP1-216ENST00000556867 SYNRGQ9UMZ2 1314 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 B4DLN1 442 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 ADAMTS4O75173 837 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 PGK1P00558 417 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 MRPL12P52815 198 aaKnown RBP26.44■■□□□ 1.82
TDP1-216ENST00000556867 APOBRQ0VD83 1088 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 TAPT1Q6NXT6 567 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 RNF180Q86T96 592 aa26.44■■□□□ 1.82
TDP1-216ENST00000556867 CNTNAP5Q8WYK1 1306 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 PDE4DQ08499 809 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 PPP2R5BQ15173 497 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 PRPF38BQ5VTL8 546 aaKnown RBP26.43■■□□□ 1.82
TDP1-216ENST00000556867 EEPD1Q7L9B9 569 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 NSUN6Q8TEA1 469 aaKnown RBP26.43■■□□□ 1.82
TDP1-216ENST00000556867 DPF3Q92784 378 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 TAAR1Q96RJ0 339 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 RMDN3Q96TC7 470 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 CYP46A1Q9Y6A2 500 aa26.43■■□□□ 1.82
TDP1-216ENST00000556867 ADCYAP1R1P41586 468 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 ANAPC15P60006 121 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 TNFAIP2Q03169 654 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 FUT2Q10981 343 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 IQSEC1Q6DN90 963 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 UPF3AQ9H1J1 476 aaKnown RBP26.42■■□□□ 1.82
TDP1-216ENST00000556867 PDGFCQ9NRA1 345 aa26.42■■□□□ 1.82
TDP1-216ENST00000556867 FAM217BQ9NTX9 383 aaPredicted RBP26.42■■□□□ 1.82
TDP1-216ENST00000556867 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 GCOM1H8Y6P7 765 aaPredicted RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 MYCNP04198 464 aaPredicted RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 POLR2MP0CAP2 368 aa26.41■■□□□ 1.82
TDP1-216ENST00000556867 METAP2P50579 478 aaKnown RBP eCLIP26.41■■□□□ 1.82
TDP1-216ENST00000556867 EVCP57679 992 aa26.41■■□□□ 1.82
TDP1-216ENST00000556867 CCDC82Q8N4S0 544 aa26.41■■□□□ 1.82
TDP1-216ENST00000556867 IWS1Q96ST2 819 aa26.41■■□□□ 1.82
TDP1-216ENST00000556867 SENP6Q9GZR1 1112 aaPredicted RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 NAP1L2Q9ULW6 460 aaPredicted RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 GNEQ9Y223 722 aaKnown RBP26.41■■□□□ 1.82
TDP1-216ENST00000556867 RBM47A0AV96 593 aaKnown RBP26.4■■□□□ 1.82
TDP1-216ENST00000556867 CST5P28325 142 aaPredicted RBP26.4■■□□□ 1.82
TDP1-216ENST00000556867 CDC27P30260 824 aa26.4■■□□□ 1.82
TDP1-216ENST00000556867 GJA9P57773 515 aa26.4■■□□□ 1.82
TDP1-216ENST00000556867 NKX3-2P78367 333 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms