RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 KBTBD13C9JR72 458 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 NFIBO00712 420 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 ZBTB5O15062 677 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 PTGS1P23219 599 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 HSPA4P34932 840 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 IRX5P78411 483 aaPredicted RBP16.35■□□□□ 0.21
SLIRP-207ENST00000556831 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
SLIRP-207ENST00000556831 TSGA10IPQ3SY00 556 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 BLOC1S2Q6QNY1 142 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 ARMCX2Q7L311 632 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 CCDC144CPQ8IYA2 1237 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 JAKMIP1Q96N16 626 aaKnown RBP16.35■□□□□ 0.21
SLIRP-207ENST00000556831 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
SLIRP-207ENST00000556831 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 ADCY6O43306 1168 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
SLIRP-207ENST00000556831 ZNF865P0CJ78 1059 aaPredicted RBP16.34■□□□□ 0.21
SLIRP-207ENST00000556831 ACVR2BQ13705 512 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
SLIRP-207ENST00000556831 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 MAF1Q9H063 256 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 SPC25Q9HBM1 224 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 XPNPEP3Q9NQH7 507 aa16.34■□□□□ 0.21
SLIRP-207ENST00000556831 LOC102724159A0A0B4J2E5 919 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 DNM1LO00429 736 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 PWP2Q15269 919 aaKnown RBP16.33■□□□□ 0.2
SLIRP-207ENST00000556831 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
SLIRP-207ENST00000556831 RNF180Q86T96 592 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
SLIRP-207ENST00000556831 EVI5O60447 810 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 COL6A1P12109 1028 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-207ENST00000556831 RPS6P62753 249 aaKnown RBP16.32■□□□□ 0.2
SLIRP-207ENST00000556831 PDE4DQ08499 809 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 ADCK5Q3MIX3 580 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
SLIRP-207ENST00000556831 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 CLEC4DQ8WXI8 215 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 PIBF1Q8WXW3 757 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 PIGSQ96S52 555 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
SLIRP-207ENST00000556831 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
SLIRP-207ENST00000556831 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 ZBTB43O43298 467 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 CFBP00751 764 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 RXRAP19793 462 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
SLIRP-207ENST00000556831 DNERQ8NFT8 737 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 KATNBL1Q9H079 304 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 VTA1Q9NP79 307 aa16.31■□□□□ 0.2
SLIRP-207ENST00000556831 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
SLIRP-207ENST00000556831 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 GOLGA8BA8MQT2 603 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
SLIRP-207ENST00000556831 SMARCA1P28370 1054 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 RTN1Q16799 776 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
SLIRP-207ENST00000556831 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 PGK1P00558 417 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 RPS6KB1P23443 525 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 ARHGEF16Q5VV41 709 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 Q6ZUG5 572 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 EEPD1Q7L9B9 569 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 FBXO16Q8IX29 292 aaPredicted RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 NSUN6Q8TEA1 469 aaKnown RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 KCNB2Q92953 911 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
SLIRP-207ENST00000556831 SENP6Q9GZR1 1112 aaPredicted RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
SLIRP-207ENST00000556831 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
SLIRP-207ENST00000556831 DUSP11O75319 330 aaKnown RBP16.28■□□□□ 0.2
SLIRP-207ENST00000556831 PLEKHA8P1O95397 391 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 C6orf222P0C671 652 aaPredicted RBP16.28■□□□□ 0.2
SLIRP-207ENST00000556831 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.27e-8■□□□□ 9.9
SLIRP-207ENST00000556831 RCAN1P53805 252 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 TNFAIP2Q03169 654 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 LRRC41Q15345 812 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
SLIRP-207ENST00000556831 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms