RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 BIN2Q9UBW5 565 aaPredicted RBP11.17□□□□□ -0.62
MARK3-211ENST00000556744 DIS3Q9Y2L1 958 aaKnown RBP11.17□□□□□ -0.62
MARK3-211ENST00000556744 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
MARK3-211ENST00000556744 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
MARK3-211ENST00000556744 ZNF536O15090 1300 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 DNAJC25-GNG10A0A024R161 153 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 ZBED4O75132 1171 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 CYP21A2P08686 494 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 FCER1AP12319 257 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
MARK3-211ENST00000556744 ADORA2AP29274 412 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 ABL2P42684 1182 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 STAT2P52630 851 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 CACNB2Q08289 660 aaPredicted RBP11.16□□□□□ -0.62
MARK3-211ENST00000556744 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
MARK3-211ENST00000556744 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 KRT23Q9C075 422 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.16□□□□□ -0.62
MARK3-211ENST00000556744 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
MARK3-211ENST00000556744 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
MARK3-211ENST00000556744 PDHBP11177 359 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 PLS1Q14651 629 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 ZNF792Q3KQV3 632 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 NCAPG2Q86XI2 1143 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
MARK3-211ENST00000556744 KIFC2Q96AC6 838 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 CCDC136Q96JN2 1154 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 DEFB118Q96PH6 123 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
MARK3-211ENST00000556744 ESYT1Q9BSJ8 1104 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 LSG1Q9H089 658 aaKnown RBP11.15□□□□□ -0.62
MARK3-211ENST00000556744 TOMM22Q9NS69 142 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
MARK3-211ENST00000556744 B4E1Z4 1266 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 ZNF543Q08ER8 600 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 SEC23AQ15436 765 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 TKFCQ3LXA3 575 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 MFSD14CQ5VZR4 134 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 DESI1Q6ICB0 168 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 SNRNP48Q6IEG0 339 aaKnown RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 KCTD1Q719H9 257 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 SKAP1Q86WV1 359 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 RANBP17Q9H2T7 1088 aaKnown RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 CWC22Q9HCG8 908 aaKnown RBP11.14□□□□□ -0.63
MARK3-211ENST00000556744 SLC5A4Q9NY91 659 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 NRBP1Q9UHY1 535 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 TAF6LQ9Y6J9 622 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
MARK3-211ENST00000556744 PLXNA1Q9UIW2 1896 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 NR1I2O75469 434 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 CYBAP13498 195 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 KCTD2Q14681 263 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 MAMDC4Q6UXC1 1216 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 MMP19Q99542 508 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 RAVER2Q9HCJ3 691 aaKnown RBP11.13□□□□□ -0.63
MARK3-211ENST00000556744 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
MARK3-211ENST00000556744 E7EWF7 191 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
MARK3-211ENST00000556744 CYP2C19P33261 490 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
MARK3-211ENST00000556744 SYDE2Q5VT97 1194 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 STOX1Q6ZVD7 989 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 CPXCR1Q8N123 301 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 FGD4Q96M96 766 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 ZKSCAN3Q9BRR0 538 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
MARK3-211ENST00000556744 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
MARK3-211ENST00000556744 TNKSO95271 1327 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 MSCO60682 206 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
MARK3-211ENST00000556744 ICAM1P05362 532 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
MARK3-211ENST00000556744 FAM133AQ8N9E0 248 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
MARK3-211ENST00000556744 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 TINF2Q9BSI4 451 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 MAF1Q9H063 256 aa11.11□□□□□ -0.63
MARK3-211ENST00000556744 WDR19Q8NEZ3 1342 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms