RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MTA3Q9BTC8 594 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 FAM184BQ9ULE4 1060 aa12.06□□□□□ -0.48
SNX6-208ENST00000556712 OPLAHO14841 1288 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 HSPA4P34932 840 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 EXOSC10Q01780 885 aaKnown RBP12.05□□□□□ -0.48
SNX6-208ENST00000556712 ARRDC4Q8NCT1 418 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
SNX6-208ENST00000556712 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 RIOX1Q9H6W3 641 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
SNX6-208ENST00000556712 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
SNX6-208ENST00000556712 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 KIAA1217Q5T5P2 1943 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 hCG_1642624A0A1W2PR95 340 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 REC8O95072 547 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 CFBP00751 764 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 SYN1P17600 705 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 LIFRP42702 1097 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 KRT32Q14532 448 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 TAPT1Q6NXT6 567 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
SNX6-208ENST00000556712 SRBD1Q8N5C6 995 aaKnown RBP12.04□□□□□ -0.48
SNX6-208ENST00000556712 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
SNX6-208ENST00000556712 MORC4Q8TE76 937 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 KCNB2Q92953 911 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 ADD3Q9UEY8 706 aaKnown RBP12.04□□□□□ -0.48
SNX6-208ENST00000556712 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 MRPL11Q9Y3B7 192 aaKnown RBP12.04□□□□□ -0.48
SNX6-208ENST00000556712 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
SNX6-208ENST00000556712 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
SNX6-208ENST00000556712 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
SNX6-208ENST00000556712 SMPD1P17405 629 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 HOXA13P31271 388 aaPredicted RBP12.03□□□□□ -0.48
SNX6-208ENST00000556712 KIF5BP33176 963 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 RTP1P59025 263 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 BEX3Q00994 111 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 TNFAIP2Q03169 654 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 PDE4DQ08499 809 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
SNX6-208ENST00000556712 RNF180Q86T96 592 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 SGMS1Q86VZ5 419 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 TAAR1Q96RJ0 339 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 MAP3K14Q99558 947 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 SPZ1Q9BXG8 430 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 VTA1Q9NP79 307 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 NR2E3Q9Y5X4 410 aa12.03□□□□□ -0.48
SNX6-208ENST00000556712 CEP290O15078 2479 aa12.02□□□□□ -0.48
SNX6-208ENST00000556712 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 KLF18A0A0U1RQI7 1052 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 A0A1W2PQ45 241 aaPredicted RBP12.02□□□□□ -0.49
SNX6-208ENST00000556712 A0A1W2PQY0 241 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 CALM1P0DP23 149 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 CALM2P0DP24 149 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 CALM3P0DP25 149 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
SNX6-208ENST00000556712 EDNRBP24530 442 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 SLC39A5Q6ZMH5 540 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 TMTC3Q6ZXV5 915 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 MCF2L2Q86YR7 1114 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 TMTC2Q8N394 836 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 RGS22Q8NE09 1264 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 KLHDC9Q8NEP7 349 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
SNX6-208ENST00000556712 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
SNX6-208ENST00000556712 PHF24Q9UPV7 400 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 GNEQ9Y223 722 aaKnown RBP12.02□□□□□ -0.49
SNX6-208ENST00000556712 ATP11BQ9Y2G3 1177 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.49
SNX6-208ENST00000556712 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 GOLGA8BA8MQT2 603 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 CTAGE5O15320 804 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 ZBTB43O43298 467 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
SNX6-208ENST00000556712 HSD17B4P51659 736 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 ACLYP53396 1101 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 GJA9P57773 515 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 FGD1P98174 961 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 APOBRQ0VD83 1088 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 KCNA10Q16322 511 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 TRIM60Q495X7 471 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 CCSAPQ6IQ19 270 aaPredicted RBP12.01□□□□□ -0.49
SNX6-208ENST00000556712 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 Q6ZUG5 572 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 FANCBQ8NB91 859 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
SNX6-208ENST00000556712 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
SNX6-208ENST00000556712 SEC63Q9UGP8 760 aaKnown RBP12.01□□□□□ -0.49
SNX6-208ENST00000556712 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
SNX6-208ENST00000556712 DNAH12Q6ZR08 3092 aa12□□□□□ -0.49
SNX6-208ENST00000556712 LOC102724159A0A0B4J2E5 919 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms