RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
NEK9-209ENST00000556170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEK9-209ENST00000556170 DAGLAQ9Y4D2 1042 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEK9-209ENST00000556170 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 ZFYVE27Q5T4F4 411 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 PANX2Q96RD6 677 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEK9-209ENST00000556170 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 STK4Q13043 487 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.233e-6■□□□□ 10.2
NEK9-209ENST00000556170 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
NEK9-209ENST00000556170 ZNF384Q8TF68 577 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 ABHD10Q9NUJ1 306 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 CDC23Q9UJX2 597 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 MYOCDQ8IZQ8 938 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 BUB1O43683 1085 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 NDUFA10O95299 355 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
NEK9-209ENST00000556170 DNAJC21Q5F1R6 531 aaKnown RBP16.49■□□□□ 0.23
NEK9-209ENST00000556170 FAM26FQ5R3K3 315 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 RCSD1Q6JBY9 416 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 RDH13Q8NBN7 331 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 KIFC2Q96AC6 838 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 PANK4Q9NVE7 773 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 POLLQ9UGP5 575 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 MYO6Q9UM54 1294 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 CCNE1P24864 410 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 OAS2P29728 719 aaKnown RBP16.49■□□□□ 0.23
NEK9-209ENST00000556170 SP4Q02446 784 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 GPATCH11Q8N954 259 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 ANKRD7Q92527 254 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 SECISBP2LQ93073 1101 aaKnown RBP16.49■□□□□ 0.23
NEK9-209ENST00000556170 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
NEK9-209ENST00000556170 TRIM10Q9UDY6 481 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 C5P01031 1676 aa16.49■□□□□ 0.23
NEK9-209ENST00000556170 PPIP5K2O43314 1243 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 MAP9Q49MG5 647 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 HOMER2Q9NSB8 354 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 STXBP3O00186 592 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 ZBTB22O15209 634 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 CXCR5P32302 372 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 SMC1AQ14683 1233 aaKnown RBP16.48■□□□□ 0.23
NEK9-209ENST00000556170 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 REXO1L1PQ8IX06 675 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 FAM13AO94988 1023 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
NEK9-209ENST00000556170 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
NEK9-209ENST00000556170 INTS13Q9NVM9 706 aa16.48■□□□□ 0.23
NEK9-209ENST00000556170 DDX41Q9UJV9 622 aaKnown RBP16.48■□□□□ 0.23
NEK9-209ENST00000556170 CETN3O15182 167 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 CYTH3O43739 400 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 GYPCP04921 128 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 TXLNBQ8N3L3 684 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
NEK9-209ENST00000556170 AK8Q96MA6 479 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 LAD1O00515 517 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 GYS2P54840 703 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 DDX12PQ92771 950 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 TDRD3Q9H7E2 651 aaKnown RBP16.47■□□□□ 0.23
NEK9-209ENST00000556170 HDAC6Q9UBN7 1215 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 POLR2FP61218 127 aaKnown RBP16.47■□□□□ 0.23
NEK9-209ENST00000556170 SEPT2Q15019 361 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 ANKRD40Q6AI12 368 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 IFT81Q8WYA0 676 aa16.47■□□□□ 0.23
NEK9-209ENST00000556170 E9PMD0 336 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 CKAP4Q07065 602 aaKnown RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 ADGRF4Q8IZF3 695 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 TRIM9Q9C026 710 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 CWC15Q9P013 229 aaKnown RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 GCNT3O95395 438 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 VPS36Q86VN1 386 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 COA1Q9GZY4 146 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 ADAMTS3O15072 1205 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 TFRCP02786 760 aaKnown RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 PNMA6AP0CW24 399 aaPredicted RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 PDE6BP35913 854 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 KLK7P49862 253 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 ABCB5Q2M3G0 1257 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 TBC1D10BQ4KMP7 808 aaPredicted RBP16.46■□□□□ 0.23
NEK9-209ENST00000556170 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 CSRNP1Q96S65 589 aa16.46■□□□□ 0.23
NEK9-209ENST00000556170 TSPYL1Q9H0U9 437 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms